RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 OR5P2Q8WZ92 322 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 LRIG1Q96JA1 1093 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 DDOQ99489 341 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 CWH43Q9H720 699 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 ELL3Q9HB65 397 aaPredicted RBP13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 FZD3Q9NPG1 666 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 KLHL9Q9P2J3 617 aa13.75□□□□□ -0.21
RPRD1A-202ENST00000399022 COL11A1P12107 1806 aaPredicted RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 HEPACAM2A8MVW5 462 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 UPK1AO00322 258 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 PRAF2O60831 178 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 LALBAP00709 142 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 CD2P06729 351 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 GNSP15586 552 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 GPX2P18283 190 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 BMP8BP34820 402 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 SLC14A2Q15849 920 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 YIF1BQ5BJH7 314 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 BMP8AQ7Z5Y6 402 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 ADGRF3Q8IZF5 1079 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 C16orf78Q8WTQ4 265 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 RBM18Q96H35 190 aaKnown RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 ALG8Q9BVK2 526 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 ACOXLQ9NUZ1 547 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 AP1M2Q9Y6Q5 423 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 CACNA1CQ13936 2221 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 TRBV2A0A0J9YWF9 115 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 A0A1B0GVT2 93 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 FAM183AA6NL82 134 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 LRRTM2O43300 516 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 SC5DO75845 299 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 TIMP2P16035 220 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 CR2P20023 1033 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 GABRA5P31644 462 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 EIF5AP63241 154 aaKnown RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 YBX1P67809 324 aaKnown RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 ZNF169Q14929 603 aaPredicted RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 GRHL2Q6ISB3 625 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 ZDHHC1Q8WTX9 485 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 MAFIPQ8WZ33 124 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 DDX31Q9H8H2 851 aaKnown RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 MCCC2Q9HCC0 563 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 LYARQ9NX58 379 aaKnown RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 MRPS33Q9Y291 106 aaKnown RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 TXNL1O43396 289 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 SOX30O94993 753 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 RAB3AP20336 220 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 NFYAP23511 347 aaPredicted RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 SUOXP51687 545 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 MINDY4Q4G0A6 757 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 PARS2Q7L3T8 475 aaKnown RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 GTPBP8Q8N3Z3 284 aaPredicted RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 MS4A15Q8N5U1 240 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 RASGEF1AQ8N9B8 481 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 FBXO15Q8NCQ5 510 aaPredicted RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 ABCG4Q9H172 646 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 PCDHGA2Q9Y5H1 932 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 HIDE1A8MVS5 230 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 GPR37L1O60883 481 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 NDUFV2P19404 249 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 AGTR1P30556 359 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 ETV6P41212 452 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 PGDP52209 483 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 MRPL58Q14197 206 aaKnown RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 TRAM1Q15629 374 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 AANATQ16613 207 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 CPXM2Q8N436 756 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 ZNF527Q8NB42 609 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 TTLQ8NG68 377 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 OR2A12Q8NGT7 310 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 DPYSL5Q9BPU6 564 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 MACROD1Q9BQ69 325 aa13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 PRMT8Q9NR22 394 aaPredicted RBP13.74□□□□□ -0.21
RPRD1A-202ENST00000399022 F5H5P2 479 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 FRS3O43559 492 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 B3GALT2O43825 422 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 PEX14O75381 377 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 ADRB3P13945 408 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 SRP9P49458 86 aaKnown RBP13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 TMPRSS12Q86WS5 348 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 CREB3L4Q8TEY5 395 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 ZNF480Q8WV37 535 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 OPALINQ96PE5 141 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 CDCA4Q9BXL8 241 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 SCN2BO60939 215 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 FZD7O75084 574 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 IGLV3-27P01718 113 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 DLX5P56178 289 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 ELOAQ14241 798 aaKnown RBP13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 KLHL26Q53HC5 615 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 KRBOX4Q5JUW0 171 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 CD300LGQ6UXG3 332 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 BAIAP2L2Q6UXY1 529 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 S100A13Q99584 98 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 NOX3Q9HBY0 568 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 UBL4AP11441 157 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 RAP2BP61225 183 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 SLC7A9P82251 487 aa13.73□□□□□ -0.21
RPRD1A-202ENST00000399022 CCSMST1Q4G0I0 132 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms