RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 GCGRP47871 477 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 STXBP1P61764 594 aaKnown RBP23.84■■□□□ 1.41
COL13A1-203ENST00000398969 BTN3A2P78410 334 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 MFSD12Q6NUT3 480 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 OR7G2Q8NG99 324 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 CDS1Q92903 461 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 KCNJ15Q99712 375 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 SYNDIG1Q9H7V2 258 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 ISG20L2Q9H9L3 353 aaKnown RBP23.84■■□□□ 1.41
COL13A1-203ENST00000398969 KLHL21Q9UJP4 597 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 SLC7A7Q9UM01 511 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 CLCA3PQ9Y6N3 262 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 MAU2Q9Y6X3 613 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 FAM183AA6NL82 134 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 DVL2O14641 736 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 ZNF425Q6IV72 752 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 CXXC5Q7LFL8 322 aaKnown RBP23.84■■□□□ 1.41
COL13A1-203ENST00000398969 LSRQ86X29 649 aaPredicted RBP23.84■■□□□ 1.41
COL13A1-203ENST00000398969 NLKQ9UBE8 527 aa23.84■■□□□ 1.41
COL13A1-203ENST00000398969 MDC1Q14676 2089 aaKnown RBP23.83■■□□□ 1.41
COL13A1-203ENST00000398969 FAM240BA0A1B0GVZ2 78 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 DUXAA6NLW8 204 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 GALP22466 123 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 CMPK1P30085 196 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 ZNF836Q6ZNA1 936 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 HDDC3Q8N4P3 179 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 YIPF7Q8N8F6 280 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 TOR1AIP2Q8NFQ8 470 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 OR51G2Q8NGK0 314 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 JPH3Q8WXH2 748 aaPredicted RBP23.83■■□□□ 1.41
COL13A1-203ENST00000398969 C10orf90Q96M02 699 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 MS4A4EQ96PG1 132 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 MYADMQ96S97 322 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 UBQLN3Q9H347 655 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 MOSPD1Q9UJG1 213 aa23.83■■□□□ 1.41
COL13A1-203ENST00000398969 OR6C70A6NIJ9 312 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 SGK494L7N484 410 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 CLDN20P56880 219 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 B3GLCTQ6Y288 498 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 TRILQ7L0X0 811 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 YAF2Q8IY57 180 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 KCT2Q8NC54 265 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 OTULINQ96BN8 352 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 UPRTQ96BW1 309 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 FCRL4Q96PJ5 515 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 MTHFD2LQ9H903 347 aaPredicted RBP23.82■■□□□ 1.4
COL13A1-203ENST00000398969 ADAM30Q9UKF2 790 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 GPSM3Q9Y4H4 160 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 GOLGA4Q13439 2230 aaKnown RBP23.82■■□□□ 1.4
COL13A1-203ENST00000398969 A0A1W2PP55 124 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 FAM25AB3EWG3 89 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 FAM25CB3EWG5 89 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 FAM25GB3EWG6 89 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 GTPBP1O00178 669 aaKnown RBP23.82■■□□□ 1.4
COL13A1-203ENST00000398969 SLC19A2O60779 497 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 TRIM3O75382 744 aaPredicted RBP23.82■■□□□ 1.4
COL13A1-203ENST00000398969 CTBP2P56545 445 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 CLDN2P57739 230 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 SF3A2Q15428 464 aaKnown RBP23.82■■□□□ 1.4
COL13A1-203ENST00000398969 RPE65Q16518 533 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 TJAP1Q5JTD0 557 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 CDC73Q6P1J9 531 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 SLC17A4Q9Y2C5 497 aa23.82■■□□□ 1.4
COL13A1-203ENST00000398969 RNF13O43567 381 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 RGS9O75916 674 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-203ENST00000398969 ZGLP1P0C6A0 271 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 BDH1Q02338 343 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 EFR3AQ14156 821 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 SNAP47Q5SQN1 464 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 TIGD3Q6B0B8 471 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 PLBD1Q6P4A8 553 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 DGLUCYQ7Z3D6 616 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 NR2C2APQ86WQ0 139 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 LIX1LQ8IVB5 337 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 KXD1Q9BQD3 176 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 RSPH9Q9H1X1 276 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-203ENST00000398969 WDR45Q9Y484 360 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 SCAMP1O15126 338 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 KAT7O95251 611 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 SMARCD3Q6STE5 483 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 MTSS1LQ765P7 747 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 GID4Q8IVV7 300 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 LRRC25Q8N386 305 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-203ENST00000398969 COL26A1Q96A83 441 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 NTMQ9P121 344 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 PTGFRNQ9P2B2 879 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 SIRT4Q9Y6E7 314 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-203ENST00000398969 STON1Q9Y6Q2 735 aa23.81■■□□□ 1.4
COL13A1-203ENST00000398969 C12orf71A8MTZ7 269 aa23.8■■□□□ 1.4
COL13A1-203ENST00000398969 RNGTTO60942 597 aaKnown RBP23.8■■□□□ 1.4
COL13A1-203ENST00000398969 ELK1P19419 428 aa23.8■■□□□ 1.4
COL13A1-203ENST00000398969 RNF144AP50876 292 aaPredicted RBP23.8■■□□□ 1.4
COL13A1-203ENST00000398969 ZNF136P52737 540 aa23.8■■□□□ 1.4
COL13A1-203ENST00000398969 C2orf27AQ580R0 203 aa23.8■■□□□ 1.4
COL13A1-203ENST00000398969 VN1R4Q7Z5H5 301 aa23.8■■□□□ 1.4
COL13A1-203ENST00000398969 BRIX1Q8TDN6 353 aaKnown RBP23.8■■□□□ 1.4
COL13A1-203ENST00000398969 ZFPM2Q8WW38 1151 aa23.8■■□□□ 1.4
COL13A1-203ENST00000398969 MARVELD1Q9BSK0 173 aa23.8■■□□□ 1.4
COL13A1-203ENST00000398969 RMI1Q9H9A7 625 aa23.8■■□□□ 1.4
COL13A1-203ENST00000398969 KRCC1Q9NPI7 259 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms