RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 HBQ1P09105 142 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 CLUP10909 449 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 EPB41P11171 864 aaKnown RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 UMPSP11172 480 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 HNRNPA2B1P22626 353 aaKnown RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 CA8P35219 290 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 ERVPABLB-1P60509 514 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 RPL8P62917 257 aaKnown RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 PLOD1Q02809 727 aaPredicted RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 RIPPLY1Q0D2K3 151 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 IL18R1Q13478 541 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 TMEM52BQ4KMG9 183 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 UTF1Q5T230 341 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 ZNF57Q68EA5 555 aaPredicted RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 ZNF774Q6NX45 483 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 BAIAP2L2Q6UXY1 529 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 FAM43BQ6ZT52 329 aaPredicted RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 LANCL3Q6ZV70 420 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 SERPINA9Q86WD7 417 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 C9orf40Q8IXQ3 194 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 GPR137CQ8N3F9 429 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 STEAP2Q8NFT2 490 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 OR9A4Q8NGU2 314 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 ADAMTS16Q8TE57 1224 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 AGAP11Q8TF27 550 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 SLC5A11Q8WWX8 675 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 RLN3Q8WXF3 142 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 FAM3CQ92520 227 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 THRSPQ92748 146 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 MYLPFQ96A32 169 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 TMEM80Q96HE8 168 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 DHTKD1Q96HY7 919 aaPredicted RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 MCCC1Q96RQ3 725 aaPredicted RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 CITED1Q99966 193 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 APOL2Q9BQE5 337 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 ERP44Q9BS26 406 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 DPH7Q9BTV6 452 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 NFKBIZQ9BYH8 718 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 POLR3FQ9H1D9 316 aaPredicted RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 MEAF6Q9HAF1 191 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 WRAP73Q9P2S5 460 aaPredicted RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 CHRNA9Q9UGM1 479 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 SAMD4AQ9UPU9 718 aaKnown RBP2.08□□□□□ -2.08
CD47-203ENST00000398258 L3MBTL1Q9Y468 752 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 KDRP35968 1356 aa2.08□□□□□ -2.08
CD47-203ENST00000398258 ATAD2BQ9ULI0 1458 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 ZSCAN5CA6NGD5 496 aaPredicted RBP2.07□□□□□ -2.08
CD47-203ENST00000398258 CCT8L1PA6NM43 557 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 G3V3Y1 287 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 BTN3A3O00478 584 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 CASKO14936 926 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 OR1F1O43749 312 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 NUDT21O43809 227 aaKnown RBP2.07□□□□□ -2.08
CD47-203ENST00000398258 EFNA2O43921 213 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 BCAS1O75363 584 aaPredicted RBP2.07□□□□□ -2.08
CD47-203ENST00000398258 NEBLO76041 1014 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 ALPIP09923 528 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 GCFC2P16383 781 aaKnown RBP2.07□□□□□ -2.08
CD47-203ENST00000398258 PGCP20142 388 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 IGHV1-2P23083 117 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 DLSTP36957 453 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 ARFIP1P53367 373 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 NTHL1P78549 312 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 PUDPQ08623 228 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 ZNF154Q13106 437 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 RUNX3Q13761 415 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 SELPLGQ14242 412 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 PDK4Q16654 411 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 ANKDD1AQ495B1 522 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 PYHIN1Q6K0P9 492 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 CGB2Q6NT52 195 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 FAM71F2Q6NXP2 309 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 FAHD2BQ6P2I3 314 aaPredicted RBP2.07□□□□□ -2.08
CD47-203ENST00000398258 PAMR1Q6UXH9 720 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 LRRC70Q7Z2Q7 622 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 VASH2Q86V25 355 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 CDC20BQ86Y33 519 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 UNC5CLQ8IV45 518 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 SLC39A11Q8N1S5 342 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 C15orf54Q8N8G6 183 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 ZSCAN4Q8NAM6 433 aaPredicted RBP2.07□□□□□ -2.08
CD47-203ENST00000398258 OR52M1Q8NGK5 317 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 OR2T3Q8NH03 318 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 ZNF671Q8TAW3 534 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 VN1R17PQ8TDU5 208 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 IL1F10Q8WWZ1 152 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 TADA1Q96BN2 335 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 FAHD2AQ96GK7 314 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 PPP1R16AQ96I34 528 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 SENP8Q96LD8 212 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 CCT8L2Q96SF2 557 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 OMDQ99983 421 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 RHOJQ9H4E5 214 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 TIGARQ9NQ88 270 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.07□□□□□ -2.08
CD47-203ENST00000398258 UTP6Q9NYH9 597 aaKnown RBP2.07□□□□□ -2.08
CD47-203ENST00000398258 CRLS1Q9UJA2 301 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 RASD1Q9Y272 281 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 OR10H1Q9Y4A9 318 aa2.07□□□□□ -2.08
CD47-203ENST00000398258 TRIOBPQ9H2D6 2365 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms