RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SOWAHCQ53LP3 525 aaPredicted RBP21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 ASB18Q6ZVZ8 466 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 CCDC80Q76M96 950 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 ULK2Q8IYT8 1036 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 POGLUT1Q8NBL1 392 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 OR52P1PQ8NH57 321 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 PCDHAC1Q9H158 963 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 KLHL1Q9NR64 748 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 DTNAQ9Y4J8 743 aa21.63■■□□□ 1.05
TSPAN4-203ENST00000397397 FAM208BQ5VWN6 2430 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 AGAP5A6NIR3 686 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 G3V3Y1 287 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 M0QX08 132 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 SERPINB7O75635 380 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 DBIP07108 87 aaKnown RBP21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 SP1P08047 785 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 RPS4Y1P22090 263 aaKnown RBP21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 KLHL26Q53HC5 615 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 GLYATQ6IB77 296 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 SLC25A25Q6KCM7 469 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 PGM2L1Q6PCE3 622 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 APOOLQ6UXV4 268 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 MARCH3Q86UD3 253 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 PTRH1Q86Y79 214 aaKnown RBP21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 RNF138Q8WVD3 245 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 WDR60Q8WVS4 1066 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 CCDC124Q96CT7 223 aaKnown RBP21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 SPATA5L1Q9BVQ7 753 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 OSBPL11Q9BXB4 747 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 HES7Q9BYE0 225 aa21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 ZNF71Q9NQZ8 489 aaPredicted RBP21.62■■□□□ 1.05
TSPAN4-203ENST00000397397 ALG1L2C9J202 215 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 DPM1O60762 260 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 IL7RP16871 459 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 KDELR2P33947 212 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 PTGDSP41222 190 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 FXNQ16595 210 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 LRRC23Q53EV4 343 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 ZNF766Q5HY98 468 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 TMEM81Q6P7N7 255 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 PCSK4Q6UW60 755 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 VRK2Q86Y07 508 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 GATSQ8NAP1 163 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 OIT3Q8WWZ8 545 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 FAM162AQ96A26 154 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 UBL7Q96S82 380 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 ANGPTL4Q9BY76 406 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 MMADHCQ9H3L0 296 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 GALNT9Q9HCQ5 603 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 SEC14L3Q9UDX4 400 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 MAGEL2Q9UJ55 1249 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 ZNF232Q9UNY5 417 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 IFT52Q9Y366 437 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 SNX13Q9Y5W8 968 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 MGAQ8IWI9 3026 aa21.61■■□□□ 1.05
TSPAN4-203ENST00000397397 TRAV17A0A0B4J275 112 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 A0A1W2PQD3 144 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 OPN1SWP03999 348 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 PABPC4LP0CB38 370 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 CNR1P21554 472 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 SNTA1Q13424 505 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 TRIM25Q14258 630 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 LARS2Q15031 903 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 LIN52Q52LA3 116 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 ZNF311Q5JNZ3 666 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 TBCELQ5QJ74 424 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 SLC30A6Q6NXT4 461 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 CNTRLQ7Z7A1 2325 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 ARMC8Q8IUR7 673 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 RBMXL3Q8N7X1 1067 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 EXD3Q8N9H8 876 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 SLC26A7Q8TE54 656 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 MFRPQ9BY79 579 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 RTN4RQ9BZR6 473 aa21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 ZNF443Q9Y2A4 671 aaPredicted RBP21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 KLF13Q9Y2Y9 288 aaPredicted RBP21.6■■□□□ 1.05
TSPAN4-203ENST00000397397 ANKRD33BA6NCL7 494 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 C2orf72A6NCS6 295 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 SERINC4A6NH21 518 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 H3BNH8 94 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 ARPC2O15144 300 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 NDUFB5O43674 189 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 NME2P1O60361 137 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 MFN2O95140 757 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 ANGPTL1O95841 491 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 IFNA14P01570 189 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 THBS1P07996 1170 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 NME2P22392 152 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 GAS1P54826 345 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 FGFBP1Q14512 234 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 TMEM178AQ8NBL3 297 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 PHOSPHO1Q8TCT1 267 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 TAMM41Q96BW9 452 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 SCMH1Q96GD3 660 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 DOHHQ9BU89 302 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 MUC13Q9H3R2 512 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 PROK2Q9HC23 129 aa21.59■■□□□ 1.05
TSPAN4-203ENST00000397397 RRP9O43818 475 aaKnown RBP21.58■■□□□ 1.05
TSPAN4-203ENST00000397397 NID1P14543 1247 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms