RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 TRPV5Q9NQA5 729 aa22.15■■□□□ 1.14
PABPN1-202ENST00000397276 SLC7A7Q9UM01 511 aa22.15■■□□□ 1.14
PABPN1-202ENST00000397276 DIMT1Q9UNQ2 313 aaKnown RBP22.15■■□□□ 1.14
PABPN1-202ENST00000397276 TRAPPC4Q9Y296 219 aa22.15■■□□□ 1.14
PABPN1-202ENST00000397276 PCDHGB2Q9Y5G2 931 aa22.15■■□□□ 1.14
PABPN1-202ENST00000397276 PLD2O14939 933 aa22.14■■□□□ 1.14
PABPN1-202ENST00000397276 UBXN7O94888 489 aa22.14■■□□□ 1.14
PABPN1-202ENST00000397276 HOXC4P09017 264 aaPredicted RBP22.14■■□□□ 1.14
PABPN1-202ENST00000397276 ATXN8OSP0DMR3 200 aa22.14■■□□□ 1.14
PABPN1-202ENST00000397276 SMIM10L1P0DMW3 83 aa22.14■■□□□ 1.14
PABPN1-202ENST00000397276 ACP2P11117 423 aa22.14■■□□□ 1.14
PABPN1-202ENST00000397276 PRKAR1BP31321 381 aa22.14■■□□□ 1.14
PABPN1-202ENST00000397276 SSTR4P31391 388 aa22.14■■□□□ 1.14
PABPN1-202ENST00000397276 RFX3P48380 749 aa22.14■■□□□ 1.14
PABPN1-202ENST00000397276 SMIM10Q96HG1 83 aa22.14■■□□□ 1.14
PABPN1-202ENST00000397276 HRASLS2Q9NWW9 162 aa22.14■■□□□ 1.14
PABPN1-202ENST00000397276 CRNNQ9UBG3 495 aaPredicted RBP22.14■■□□□ 1.14
PABPN1-202ENST00000397276 GRIP1Q9Y3R0 1128 aa22.14■■□□□ 1.14
PABPN1-202ENST00000397276 SYNDIG1LA6NDD5 238 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 CPMP14384 443 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 MYL12AP19105 171 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 ILF3Q12906 894 aaKnown RBP eCLIP22.14■■□□□ 1.13
PABPN1-202ENST00000397276 MAPK14Q16539 360 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 HEPHL1Q6MZM0 1159 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 ZNF836Q6ZNA1 936 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 LHFPL3Q86UP9 236 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 PEX5LQ8IYB4 626 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 ZFP41Q8N8Y5 198 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 OR9Q1Q8NGQ5 310 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 FGF11Q92914 225 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 RERGQ96A58 199 aaPredicted RBP22.14■■□□□ 1.13
PABPN1-202ENST00000397276 ZFYVE21Q9BQ24 234 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 MTHFD2LQ9H903 347 aaPredicted RBP22.14■■□□□ 1.13
PABPN1-202ENST00000397276 TOR4AQ9NXH8 423 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 STUB1Q9UNE7 303 aa22.14■■□□□ 1.13
PABPN1-202ENST00000397276 FGF17O60258 216 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 PRG2P13727 222 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 NT5EP21589 574 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 OR2L13Q8N349 312 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 CAMKVQ8NCB2 501 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 UBASH3BQ8TF42 649 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 SLC38A2Q96QD8 506 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 SDF2Q99470 211 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 SRRQ9GZT4 340 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 SLC22A7Q9Y694 548 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 BRWD1Q9NSI6 2320 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 A0A075B6Q4 140 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 URADA6NGE7 173 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 HMX3A6NHT5 357 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 SLC2A10O95528 541 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 FUT1P19526 365 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 CD79BP40259 229 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 SHC2P98077 582 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 EXOSC7Q15024 291 aaKnown RBP22.13■■□□□ 1.13
PABPN1-202ENST00000397276 PAMR1Q6UXH9 720 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 SLC36A4Q6YBV0 504 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 ABHD13Q7L211 337 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 TRIM69Q86WT6 500 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 OR4Q3Q8NH05 313 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 ASB12Q8WXK4 309 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 RACGAP1Q9H0H5 632 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 NDUFB11Q9NX14 153 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 SEC14L4Q9UDX3 406 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 PILRAQ9UKJ1 303 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 SSR3Q9UNL2 185 aa22.13■■□□□ 1.13
PABPN1-202ENST00000397276 PRODHO43272 600 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 HCRTR1O43613 425 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 CLEC2LP0C7M8 214 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 MTNR1AP48039 350 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 GPLD1P80108 840 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 MLLT11Q13015 90 aaPredicted RBP22.12■■□□□ 1.13
PABPN1-202ENST00000397276 C1orf61Q13536 156 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 C22orf42Q6IC83 251 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 FIGNL1Q6PIW4 674 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 B3GLCTQ6Y288 498 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 NOXA1Q86UR1 476 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 GLCCI1Q86VQ1 547 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 ACOT11Q8WXI4 607 aaPredicted RBP22.12■■□□□ 1.13
PABPN1-202ENST00000397276 SLC7A6Q92536 515 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 TM9SF4Q92544 642 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 CPNE7Q9UBL6 633 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 CLCA2Q9UQC9 943 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 TSPAN19P0C672 248 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 TYRP1P17643 537 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 SRSF5Q13243 272 aaKnown RBP22.12■■□□□ 1.13
PABPN1-202ENST00000397276 KLHL22Q53GT1 634 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 RASSF6Q6ZTQ3 369 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 ABI3BPQ7Z7G0 1075 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 SLC22A18ASQ8N1D0 253 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 C11orf54Q9H0W9 315 aaPredicted RBP22.12■■□□□ 1.13
PABPN1-202ENST00000397276 IRF2BPLQ9H1B7 796 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 TRIM45Q9H8W5 580 aaPredicted RBP22.12■■□□□ 1.13
PABPN1-202ENST00000397276 CACYBPQ9HB71 228 aaKnown RBP22.12■■□□□ 1.13
PABPN1-202ENST00000397276 CSNK1G3Q9Y6M4 447 aa22.12■■□□□ 1.13
PABPN1-202ENST00000397276 PEX12O00623 359 aa22.11■■□□□ 1.13
PABPN1-202ENST00000397276 CDC42EP2O14613 210 aa22.11■■□□□ 1.13
PABPN1-202ENST00000397276 TNFSF14O43557 240 aa22.11■■□□□ 1.13
PABPN1-202ENST00000397276 CDRT1O95170 752 aa22.11■■□□□ 1.13
PABPN1-202ENST00000397276 GABRG2P18507 467 aa22.11■■□□□ 1.13
PABPN1-202ENST00000397276 AKT2P31751 481 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms