RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 PAQR5Q9NXK6 330 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 XPR1Q9UBH6 696 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 GRID1Q9ULK0 1009 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 C19orf53Q9UNZ5 99 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 GPR52Q9Y2T5 361 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 WBP11Q9Y2W2 641 aaKnown RBP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 EMC9Q9Y3B6 208 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 CCDC151A5D8V7 595 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 TTC36A6NLP5 189 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 C17orf51A8MQB3 221 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 H3BML4 177 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 PCDH7O60245 1069 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 SS18L1O75177 396 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-208ENST00000397204 AQP8O94778 261 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 SOX30O94993 753 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 IL33O95760 270 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 PLGP00747 810 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-208ENST00000397204 SBK3P0C264 359 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 TSPAN8P19075 237 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 CTBP2P56545 445 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 ACSM2AQ08AH3 577 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 C2orf54Q08AI8 447 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 TNK1Q13470 666 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 CAPRIN1Q14444 709 aaKnown RBP7.84□□□□□ -1.15
CAPN3-208ENST00000397204 ZNHIT3Q15649 155 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-208ENST00000397204 TMEM44Q2T9K0 475 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 SH2D4BQ5SQS7 431 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 ACSM2BQ68CK6 577 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 GTF2IRD2BQ6EKJ0 949 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 ADAM5Q6NVV9 412 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 MARCH3Q86UD3 253 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 GTF2IRD2Q86UP8 949 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 STK32CQ86UX6 486 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 RELL1Q8IUW5 271 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 CDYL2Q8N8U2 506 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 TRMT61AQ96FX7 289 aaKnown RBP7.84□□□□□ -1.15
CAPN3-208ENST00000397204 ZNF382Q96SR6 550 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 HBEGFQ99075 208 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 TSPYL1Q9H0U9 437 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 C3orf14Q9HBI5 128 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 Q9N2J8 555 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 TPSG1Q9NRR2 321 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 ZDHHC18Q9NUE0 388 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 NINJ2Q9NZG7 142 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 SENP1Q9P0U3 644 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 EXPH5Q8NEV8 1989 aa7.84□□□□□ -1.15
CAPN3-208ENST00000397204 PRR14LQ5THK1 2151 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 A0A087WZY1 265 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 UQCRHLA0A096LP55 91 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 A8MT66 165 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 UPK1AO00322 258 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 EIF1AYO14602 144 aaKnown RBP7.83□□□□□ -1.16
CAPN3-208ENST00000397204 ADAMDEC1O15204 470 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 ICMTO60725 284 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 SUPT7LO94864 414 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 ANGPTL1O95841 491 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 IFNA2P01563 188 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 ANXA4P09525 319 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-208ENST00000397204 IFI6P09912 130 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 CHN1P15882 459 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 TAC1P20366 129 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 PSMB1P20618 241 aaKnown RBP7.83□□□□□ -1.16
CAPN3-208ENST00000397204 DDCP20711 480 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 IMPDH1P20839 514 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 HMOX2P30519 316 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 TIA1P31483 386 aaKnown RBP eCLIP7.83□□□□□ -1.16
CAPN3-208ENST00000397204 IDUAP35475 653 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 PRR5P85299 388 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 C2orf80Q0P641 193 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 ZNF155Q12901 538 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-208ENST00000397204 STX5Q13190 355 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 CLEC12BQ2HXU8 276 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 TEX35Q5T0J7 233 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 CPTPQ5TA50 214 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 PODNL1Q6PEZ8 512 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 DNAJC14Q6Y2X3 702 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-208ENST00000397204 GPRIN3Q6ZVF9 776 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 GGNQ86UU5 652 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 WDR75Q8IWA0 830 aaKnown RBP7.83□□□□□ -1.16
CAPN3-208ENST00000397204 OR2L13Q8N349 312 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 STEAP2Q8NFT2 490 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 OR5M1Q8NGP8 315 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.83□□□□□ -1.16
CAPN3-208ENST00000397204 ELP4Q96EB1 424 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 PLPPR2Q96GM1 343 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 APIPQ96GX9 242 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 REG4Q9BYZ8 158 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 ACPTQ9BZG2 426 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 TBL1XR1Q9BZK7 514 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 RTN4RQ9BZR6 473 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 NGBQ9NPG2 151 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 EGFL7Q9UHF1 273 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 ZNF180Q9UJW8 692 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 MCTS1Q9ULC4 181 aaKnown RBP7.83□□□□□ -1.16
CAPN3-208ENST00000397204 STK38LQ9Y2H1 464 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 SNX8Q9Y5X2 465 aa7.83□□□□□ -1.16
CAPN3-208ENST00000397204 C7orf72A4D263 438 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 OVOL3O00110 214 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 TLX2O43763 284 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 KCNH1O95259 989 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms