RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 OPN3Q9H1Y3 402 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-207ENST00000397024 EML4Q9HC35 981 aaKnown RBP16.96■□□□□ 0.31
MCF2L-207ENST00000397024 FLNAP21333 2647 aaKnown RBP16.96■□□□□ 0.3
MCF2L-207ENST00000397024 LINC01387J3KSC0 135 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 SCAMP2O15127 329 aaKnown RBP16.95■□□□□ 0.3
MCF2L-207ENST00000397024 CGAP01215 116 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 DIO3P55073 304 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 EEFSECP57772 596 aaKnown RBP16.95■□□□□ 0.3
MCF2L-207ENST00000397024 SIRPAP78324 504 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 IFFO1Q0D2I5 559 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 PTGR1Q14914 329 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.95■□□□□ 0.3
MCF2L-207ENST00000397024 C6orf136Q5SQH8 315 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 FBXW10Q5XX13 1052 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 OR2A2Q6IF42 318 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 GGNQ86UU5 652 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 KRTCAP2Q8N6L1 136 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 ROPN1BQ9BZX4 212 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-207ENST00000397024 RNF122Q9H9V4 155 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 ROPN1Q9HAT0 212 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-207ENST00000397024 VDAC3Q9Y277 283 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 AP4B1Q9Y6B7 739 aa16.95■□□□□ 0.3
MCF2L-207ENST00000397024 NDUFB5O43674 189 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 TYROBPO43914 113 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 AQP8O94778 261 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 OPN1LWP04000 364 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 BPGMP07738 259 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 NGFRP08138 427 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 ALOX5P09917 674 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 CPOXP36551 454 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 SLC6A8P48029 635 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 MLC1Q15049 377 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 PON3Q15166 354 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 GUSBP1Q15486 140 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 PAMR1Q6UXH9 720 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 R3HCC1LQ7Z5L2 792 aaKnown RBP16.94■□□□□ 0.3
MCF2L-207ENST00000397024 TGIF2LYQ8IUE0 185 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 PPP3R2Q96LZ3 170 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 WFIKKN1Q96NZ8 548 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 C1orf50Q9BV19 199 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 ZNF175Q9Y473 711 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 KCNE3Q9Y6H6 103 aa16.94■□□□□ 0.3
MCF2L-207ENST00000397024 A0A1W2PRB8 838 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 TMEM114B3SHH9 223 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 SIAH2O43255 324 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 ATE1O95260 518 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 HMGN2P05204 90 aaKnown RBP16.93■□□□□ 0.3
MCF2L-207ENST00000397024 CD99P14209 185 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 PSMA4P25789 261 aaKnown RBP16.93■□□□□ 0.3
MCF2L-207ENST00000397024 HPCAL1P37235 193 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 ETV4P43268 484 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 LASP1Q14847 261 aaKnown RBP16.93■□□□□ 0.3
MCF2L-207ENST00000397024 IL23RQ5VWK5 629 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 ZCCHC12Q6PEW1 402 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 LRIG3Q6UXM1 1119 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 METTL25Q8N6Q8 603 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 COX18Q8N8Q8 333 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 ZNF610Q8N9Z0 462 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 CDS1Q92903 461 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 COQ8BQ96D53 544 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 MBD6Q96DN6 1003 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 SH3YL1Q96HL8 342 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-207ENST00000397024 CXorf36Q9H7Y0 433 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 ZNF395Q9H8N7 513 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-207ENST00000397024 UBQLN4Q9NRR5 601 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 ZCCHC3Q9NUD5 404 aaKnown RBP16.93■□□□□ 0.3
MCF2L-207ENST00000397024 TESMINQ9Y4I5 508 aa16.93■□□□□ 0.3
MCF2L-207ENST00000397024 ITM2AO43736 263 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 SKAP2O75563 359 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-207ENST00000397024 RAF1P04049 648 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 KLK2P20151 261 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 CD79BP40259 229 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 RNF144AP50876 292 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-207ENST00000397024 CD226Q15762 336 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 ATP6AP1LQ52LC2 224 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 CPTPQ5TA50 214 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 C22orf34Q6ZV56 151 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 RIMKLAQ8IXN7 391 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 GTPBP8Q8N3Z3 284 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-207ENST00000397024 PSMA8Q8TAA3 256 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 POC1BQ8TC44 478 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 OR5P2Q8WZ92 322 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 JADE3Q92613 823 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 TMEM109Q9BVC6 243 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 BTBD2Q9BX70 525 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 MED17Q9NVC6 651 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 KLHL28Q9NXS3 571 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 NDRG3Q9UGV2 375 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.92■□□□□ 0.3
MCF2L-207ENST00000397024 SNX8Q9Y5X2 465 aa16.92■□□□□ 0.3
MCF2L-207ENST00000397024 V9GYY5 206 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-207ENST00000397024 EIF1AYO14602 144 aaKnown RBP16.91■□□□□ 0.3
MCF2L-207ENST00000397024 CASKO14936 926 aa16.91■□□□□ 0.3
MCF2L-207ENST00000397024 OIP5O43482 229 aa16.91■□□□□ 0.3
MCF2L-207ENST00000397024 LYPLA1O75608 230 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-207ENST00000397024 C6orf47O95873 294 aa16.91■□□□□ 0.3
MCF2L-207ENST00000397024 IL11P20809 199 aa16.91■□□□□ 0.3
MCF2L-207ENST00000397024 MAPK1P28482 360 aa16.91■□□□□ 0.3
MCF2L-207ENST00000397024 SERPINB5P36952 375 aa16.91■□□□□ 0.3
MCF2L-207ENST00000397024 SERPINB4P48594 390 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms