RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 CORO2BQ9UQ03 480 aa9.43□□□□□ -0.9
NEDD8-202ENST00000396828 DTX4Q9Y2E6 619 aa9.43□□□□□ -0.9
NEDD8-202ENST00000396828 AP3M1Q9Y2T2 418 aa9.43□□□□□ -0.9
NEDD8-202ENST00000396828 SLC6A5Q9Y345 797 aa9.43□□□□□ -0.9
NEDD8-202ENST00000396828 PCDHB14Q9Y5E9 798 aa9.43□□□□□ -0.9
NEDD8-202ENST00000396828 ABCA4P78363 2273 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 DNHD1Q96M86 4753 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 EVPLLA8MZ36 301 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 FXYD1O00168 92 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 SYT5O00445 386 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 OR10H2O60403 315 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 GSNP06396 782 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 CPMP14384 443 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 PORP16435 677 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-202ENST00000396828 EFNA1P20827 205 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-202ENST00000396828 BMP5P22003 454 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 UQCRC2P22695 453 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 UQCRC1P31930 480 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 SOAT1P35610 550 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 SOX18P35713 384 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 FEN1P39748 380 aaKnown RBP9.42□□□□□ -0.9
NEDD8-202ENST00000396828 CDKN2CP42773 168 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 KIR2DL3P43628 341 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 AGFG1P52594 562 aaKnown RBP9.42□□□□□ -0.9
NEDD8-202ENST00000396828 ZNF136P52737 540 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 HBA1P69905 142 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 CRYZQ08257 329 aaKnown RBP9.42□□□□□ -0.9
NEDD8-202ENST00000396828 HSPB3Q12988 150 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 CEBPEQ15744 281 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 PRSS53Q2L4Q9 553 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 SLC25A35Q3KQZ1 300 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 SPDYE7PQ495Y7 208 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 ACSF3Q4G176 576 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-202ENST00000396828 SAMD4BQ5PRF9 694 aaKnown RBP9.42□□□□□ -0.9
NEDD8-202ENST00000396828 C6orf163Q5TEZ5 329 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 NANOGP8Q6NSW7 305 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 FAM180BQ6P0A1 224 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 C8orf82Q6P1X6 216 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-202ENST00000396828 BHLHB9Q6PI77 547 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 PLXDC2Q6UX71 529 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 SLC29A4Q7RTT9 530 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 CCDC116Q8IYX3 515 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 PRR22Q8IZ63 422 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 SLC15A4Q8N697 577 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 ZNF615Q8N8J6 731 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 DIO2Q92813 273 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 ADIPOR1Q96A54 375 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 NTNG2Q96CW9 530 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 CNRIP1Q96F85 164 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-202ENST00000396828 AMDHD1Q96NU7 426 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 ANKRD27Q96NW4 1050 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 CDRT15Q96T59 188 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 SLC39A3Q9BRY0 314 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 DOHHQ9BU89 302 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 CADM1Q9BY67 442 aaKnown RBP9.42□□□□□ -0.9
NEDD8-202ENST00000396828 POLDIP3Q9BY77 421 aaKnown RBP9.42□□□□□ -0.9
NEDD8-202ENST00000396828 UBQLN3Q9H347 655 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 GLIPR2Q9H4G4 154 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 RAD21L1Q9H4I0 556 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 NANOGQ9H9S0 305 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 CXorf21Q9HAI6 301 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 RASSF1Q9NS23 344 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 CNIH4Q9P003 139 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 VAPAQ9P0L0 249 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 SLAMF8Q9P0V8 285 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 BOKQ9UMX3 212 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-202ENST00000396828 SNX8Q9Y5X2 465 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 NAV3Q8IVL0 2385 aa9.42□□□□□ -0.9
NEDD8-202ENST00000396828 C2orf92A0A1B0GVN3 265 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 C2orf72A6NCS6 295 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 ANKRD65E5RJM6 399 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 CLIC1O00299 241 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 DNAJA2O60884 412 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 CIB2O75838 187 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 TRAPPC6AO75865 159 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 SLITRK5O94991 958 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 KRT75O95678 551 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 ATP1B1P05026 303 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 SLC35E2P0CK97 266 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 CD99P14209 185 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 GABRA1P14867 456 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 NQO1P15559 274 aaKnown RBP9.41□□□□□ -0.9
NEDD8-202ENST00000396828 HOXB4P17483 251 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-202ENST00000396828 S1PR1P21453 382 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 SLC6A2P23975 617 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 GDF1P27539 372 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 CEACAM8P31997 349 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-202ENST00000396828 CHI3L1P36222 383 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-202ENST00000396828 SLC7A2P52569 658 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 EEFSECP57772 596 aaKnown RBP9.41□□□□□ -0.9
NEDD8-202ENST00000396828 PRR5P85299 388 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 DUSP2Q05923 314 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 EIPR1Q53HC9 387 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 RUNDC3AQ59EK9 446 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 ANGPTL8Q6UXH0 198 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 ZNF551Q7Z340 670 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-202ENST00000396828 CDC20BQ86Y33 519 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 PSMA8Q8TAA3 256 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 SPPL2AQ8TCT8 520 aa9.41□□□□□ -0.9
NEDD8-202ENST00000396828 MOAP1Q96BY2 351 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms