RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 NKAIN2Q5VXU1 208 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 RNLSQ5VYX0 342 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 ZAR1Q86SH2 424 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 C11orf74Q86VG3 221 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 CLDN22Q8N7P3 220 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 KBTBD8Q8NFY9 601 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 FGF11Q92914 225 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 VSTM2LQ96N03 204 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 ZNF578Q96N58 590 aaPredicted RBP13.87□□□□□ -0.19
CBX3-202ENST00000396386 PRSS27Q9BQR3 290 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 MND1Q9BWT6 205 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 DCSTAMPQ9H295 470 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 LRIT1Q9P2V4 623 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 CDH10Q9Y6N8 788 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 SPAG17Q6Q759 2223 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 IRGMA1A4Y4 181 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 SNTNA6NMZ2 147 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 BCAT2O15382 392 aaPredicted RBP13.86□□□□□ -0.19
CBX3-202ENST00000396386 PRODHO43272 600 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 RAB36O95755 333 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 FOSL2P15408 326 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 CXCL12P48061 93 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 TUBA1BP68363 451 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 BTG2P78543 158 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.86□□□□□ -0.19
CBX3-202ENST00000396386 ERV3-1Q14264 604 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 ZNF267Q14586 743 aaPredicted RBP13.86□□□□□ -0.19
CBX3-202ENST00000396386 TSTQ16762 297 aaKnown RBP13.86□□□□□ -0.19
CBX3-202ENST00000396386 TIMM50Q3ZCQ8 353 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 WDR45BQ5MNZ6 344 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 USP43Q70EL4 1123 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 TUBA1AQ71U36 451 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 SLC34A3Q8N130 599 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 CARFQ8N187 725 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 SLC15A4Q8N697 577 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 VMP1Q96GC9 406 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 ZNF559Q9BR84 538 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 CNPPD1Q9BV87 410 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 SPRTNQ9H040 489 aaPredicted RBP13.86□□□□□ -0.19
CBX3-202ENST00000396386 ZBTB20Q9HC78 741 aaPredicted RBP13.86□□□□□ -0.19
CBX3-202ENST00000396386 OSGIN1Q9UJX0 560 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 LSM2Q9Y333 95 aaKnown RBP13.86□□□□□ -0.19
CBX3-202ENST00000396386 PCDHGA3Q9Y5H0 932 aa13.86□□□□□ -0.19
CBX3-202ENST00000396386 ADAMTS20P59510 1910 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 COL5A1P20908 1838 aaPredicted RBP13.85□□□□□ -0.19
CBX3-202ENST00000396386 K7ESF4 209 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 MYL12BO14950 172 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 DUX1O43812 170 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 MAOAP21397 527 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 ZNF846Q147U1 533 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 TMEM44Q2T9K0 475 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 PGGHGQ32M88 737 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 CLEC12AQ5QGZ9 265 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 PDZK1Q5T2W1 519 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 ZC3H14Q6PJT7 736 aaKnown RBP13.85□□□□□ -0.19
CBX3-202ENST00000396386 RNF113BQ8IZP6 322 aaKnown RBP13.85□□□□□ -0.19
CBX3-202ENST00000396386 CACTIN-AS1Q8N1I8 211 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 ZNF614Q8N883 585 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 OR52I1Q8NGK6 324 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 OR51Q1Q8NH59 317 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 S100ZQ8WXG8 99 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 WDR12Q9GZL7 423 aaKnown RBP13.85□□□□□ -0.19
CBX3-202ENST00000396386 Q9N2J8 555 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 HMG20AQ9NP66 347 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 IL20Q9NYY1 176 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 ZNF223Q9UK11 482 aaPredicted RBP13.85□□□□□ -0.19
CBX3-202ENST00000396386 DIMT1Q9UNQ2 313 aaKnown RBP13.85□□□□□ -0.19
CBX3-202ENST00000396386 ERVK-19Q9WJR5 959 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 CLDN16Q9Y5I7 305 aa13.85□□□□□ -0.19
CBX3-202ENST00000396386 IGHV1OR21-1A0A087WYE8 117 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 LOC100506127A0A0U1RQW1 187 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 TTC36A6NLP5 189 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 KDM4EB2RXH2 506 aaPredicted RBP13.84□□□□□ -0.19
CBX3-202ENST00000396386 HRKO00198 91 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 CCRL2O00421 344 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 CSO75390 466 aaKnown RBP13.84□□□□□ -0.19
CBX3-202ENST00000396386 LYPD3O95274 346 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 PTNP21246 168 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 DRD5P21918 477 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 CD1CP29017 333 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 GRK5P34947 590 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 TGFBR1P36897 503 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 GPR3P46089 330 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 ARL4DP49703 201 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 OR1D5P58170 312 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 PLAURQ03405 335 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 C1DQ13901 141 aaKnown RBP13.84□□□□□ -0.19
CBX3-202ENST00000396386 SERTAD2Q14140 314 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 MINDY4Q4G0A6 757 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 KLHL22Q53GT1 634 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 ZNF613Q6PF04 617 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 C16orf87Q6PH81 154 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 NPSR1Q6W5P4 371 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 WDR88Q6ZMY6 472 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 GRAMD2AQ8IUY3 354 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 OR4Q3Q8NH05 313 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 MAFAQ8NHW3 353 aaPredicted RBP13.84□□□□□ -0.19
CBX3-202ENST00000396386 RNF217Q8TC41 542 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 TMEM239Q8WW34 195 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 SH3YL1Q96HL8 342 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms