RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 PIGQQ9BRB3 760 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 PINK1Q9BXM7 581 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 PARD6BQ9BYG5 372 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 CXorf36Q9H7Y0 433 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 ZCCHC3Q9NUD5 404 aaKnown RBP16.49■□□□□ 0.23
FXN-203ENST00000396366 ST6GALNAC2Q9UJ37 374 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 PACSIN3Q9UKS6 424 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 SNX8Q9Y5X2 465 aa16.49■□□□□ 0.23
FXN-203ENST00000396366 ABCA4P78363 2273 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 NDUFB5O43674 189 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 C6orf47O95873 294 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 CPOXP36551 454 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 SERPINB5P36952 375 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 KIR2DL2P43627 348 aaPredicted RBP16.48■□□□□ 0.23
FXN-203ENST00000396366 SERPINB4P48594 390 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 DIO3P55073 304 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 SIRPAP78324 504 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 SORDQ00796 357 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 LASP1Q14847 261 aaKnown RBP16.48■□□□□ 0.23
FXN-203ENST00000396366 MLC1Q15049 377 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.48■□□□□ 0.23
FXN-203ENST00000396366 KRT71Q3SY84 523 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 CPTPQ5TA50 214 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 BTLAQ7Z6A9 289 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 COX18Q8N8Q8 333 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 GOT1L1Q8NHS2 421 aaPredicted RBP16.48■□□□□ 0.23
FXN-203ENST00000396366 FNDC9Q8TBE3 224 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 TUBGCP3Q96CW5 907 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 SH3YL1Q96HL8 342 aaPredicted RBP16.48■□□□□ 0.23
FXN-203ENST00000396366 PPP1R36Q96LQ0 422 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 C20orf27Q9GZN8 174 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 ACBD3Q9H3P7 528 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 PIGMQ9H3S5 423 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 PLEKHA6Q9Y2H5 1048 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 KCNE3Q9Y6H6 103 aa16.48■□□□□ 0.23
FXN-203ENST00000396366 SETD2Q9BYW2 2564 aaPredicted RBP16.47■□□□□ 0.23
FXN-203ENST00000396366 CTIFO43310 598 aaKnown RBP16.47■□□□□ 0.23
FXN-203ENST00000396366 TNFRSF21O75509 655 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 SMNDC1O75940 238 aaKnown RBP eCLIP16.47■□□□□ 0.23
FXN-203ENST00000396366 G6PDP11413 515 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 EEFSECP57772 596 aaKnown RBP16.47■□□□□ 0.23
FXN-203ENST00000396366 FAM27E3Q08E93 113 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 PON3Q15166 354 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 POU4F3Q15319 338 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 CD226Q15762 336 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 GLYR1Q49A26 553 aaPredicted RBP16.47■□□□□ 0.23
FXN-203ENST00000396366 ZCCHC12Q6PEW1 402 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 GGNQ86UU5 652 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 RIMKLAQ8IXN7 391 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 MREGQ8N565 214 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 COQ8BQ96D53 544 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 CHMP6Q96FZ7 201 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 PGM2Q96G03 612 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 BTBD2Q9BX70 525 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 OPN3Q9H1Y3 402 aaPredicted RBP16.47■□□□□ 0.23
FXN-203ENST00000396366 GIN1Q9NXP7 522 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 AP4B1Q9Y6B7 739 aa16.47■□□□□ 0.23
FXN-203ENST00000396366 NPIPA5A0A0B4J1W7 369 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 NPIPA7E9PJI5 369 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 LINC01387J3KSC0 135 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 OIP5O43482 229 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 HSPA4LO95757 839 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 NGFRP08138 427 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 NPIPA8P0DM63 369 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 CCT3P49368 545 aaKnown RBP16.46■□□□□ 0.23
FXN-203ENST00000396366 PRIM2P49643 509 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 POU6F2P78424 691 aaPredicted RBP16.46■□□□□ 0.23
FXN-203ENST00000396366 MPP2Q14168 576 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 CHI3L2Q15782 390 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 FBXW10Q5XX13 1052 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 OR2A2Q6IF42 318 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 ZNF474Q6S9Z5 364 aaPredicted RBP16.46■□□□□ 0.23
FXN-203ENST00000396366 ZNF781Q8N8C0 355 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 OR5P2Q8WZ92 322 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 PIGUQ9H490 435 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 RNF122Q9H9V4 155 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 UBQLN4Q9NRR5 601 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 GPATCH2Q9NW75 528 aa16.46■□□□□ 0.23
FXN-203ENST00000396366 ZNF469Q96JG9 3925 aaPredicted RBP16.46■□□□□ 0.23
FXN-203ENST00000396366 VPS13CQ709C8 3753 aa16.46■□□□□ 0.22
FXN-203ENST00000396366 A0A1W2PPR1 153 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 SH3D21A4FU49 640 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 EIF1AYO14602 144 aaKnown RBP16.45■□□□□ 0.22
FXN-203ENST00000396366 RGS16O15492 202 aaPredicted RBP16.45■□□□□ 0.22
FXN-203ENST00000396366 AQP8O94778 261 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 CGAP01215 116 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 CRHP06850 196 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 CD1EP15812 388 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 PSMA4P25789 261 aaKnown RBP16.45■□□□□ 0.22
FXN-203ENST00000396366 RPL3P39023 403 aaKnown RBP16.45■□□□□ 0.22
FXN-203ENST00000396366 SLC6A8P48029 635 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 TP53BP2Q13625 1128 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 PDCD2Q16342 344 aaPredicted RBP16.45■□□□□ 0.22
FXN-203ENST00000396366 PGS1Q32NB8 556 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 HOMEZQ8IX15 550 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 CLEC4FQ8N1N0 589 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 METTL25Q8N6Q8 603 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 OR5AK3PQ8NH89 298 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 PSMA8Q8TAA3 256 aa16.45■□□□□ 0.22
FXN-203ENST00000396366 PPP1R14CQ8TAE6 165 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms