RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 PIGUQ9H490 435 aa16.64■□□□□ 0.25
SREBF1-204ENST00000395756 LYRM4Q9HD34 91 aa16.64■□□□□ 0.25
SREBF1-204ENST00000395756 FBXL21Q9UKT6 434 aa16.64■□□□□ 0.25
SREBF1-204ENST00000395756 POMT2Q9UKY4 750 aa16.64■□□□□ 0.25
SREBF1-204ENST00000395756 NKX2-5P52952 324 aaPredicted RBP16.63■□□□□ 0.25
SREBF1-204ENST00000395756 SNRPGP62308 76 aaKnown RBP16.63■□□□□ 0.25
SREBF1-204ENST00000395756 ZNF267Q14586 743 aaPredicted RBP16.63■□□□□ 0.25
SREBF1-204ENST00000395756 AMZ1Q400G9 498 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 PFN4Q8NHR9 129 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 ZNF582Q96NG8 517 aaPredicted RBP16.63■□□□□ 0.25
SREBF1-204ENST00000395756 KCNS3Q9BQ31 491 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 HMG20AQ9NP66 347 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 WDFY3Q8IZQ1 3526 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 AGAP5A6NIR3 686 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 KIAA0513O60268 411 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 CSO75390 466 aaKnown RBP16.63■□□□□ 0.25
SREBF1-204ENST00000395756 ALAS2P22557 587 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 MXD1Q05195 221 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 SPHARQ15513 63 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 SSX1Q16384 188 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 FCRLBQ6BAA4 426 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 ZFP41Q8N8Y5 198 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 SPERTQ8NA61 448 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 OR7G1Q8NGA0 311 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 ZFPM2Q8WW38 1151 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 HSPA12BQ96MM6 686 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 PTCHD1Q96NR3 888 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 UCKL1Q9NWZ5 548 aa16.63■□□□□ 0.25
SREBF1-204ENST00000395756 SYT5O00445 386 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 IFNA16P05015 189 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 OMPP47874 163 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 IRF3Q14653 427 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 PRR23CQ6ZRP0 262 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 LHFPL3Q86UP9 236 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 CYP4Z2PQ8N1L4 340 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 VWA5B2Q8N398 1253 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 GNPDA2Q8TDQ7 276 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 GATAD2BQ8WXI9 593 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 CDCA4Q9BXL8 241 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 DTX4Q9Y2E6 619 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 MYL12BO14950 172 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 ATP1B1P05026 303 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 ATP6V1E1P36543 226 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 IFNGR2P38484 337 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 ETV5P41161 510 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 TGM4P49221 684 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 ETV1P50549 477 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 CRELD1Q96HD1 420 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 SAMD8Q96LT4 415 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 C20orf141Q9NUB4 165 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 CNOT2Q9NZN8 540 aaKnown RBP16.62■□□□□ 0.25
SREBF1-204ENST00000395756 TGFBR3LH3BV60 316 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 PROS1P07225 676 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 HBQ1P09105 142 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 HTR2AP28223 471 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 SLC15A1P46059 708 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 IFITM3Q01628 133 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 MADCAM1Q13477 382 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 DNASE1L3Q13609 305 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 ZNF846Q147U1 533 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 TRIM16LQ309B1 348 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 FHL5Q5TD97 284 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 WDR88Q6ZMY6 472 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 CDRT4Q8N9R6 151 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 BBS1Q8NFJ9 593 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 OR6Q1Q8NGQ2 317 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 ACOT11Q8WXI4 607 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-204ENST00000395756 RIT1Q92963 219 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 ENKD1Q9H0I2 346 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 TOR4AQ9NXH8 423 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 OSGIN1Q9UJX0 560 aa16.62■□□□□ 0.25
SREBF1-204ENST00000395756 A8MUA0 341 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 CCRL2O00421 344 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 GPX5O75715 221 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 GLULP15104 373 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 CSTF2P33240 577 aaKnown RBP eCLIP16.61■□□□□ 0.25
SREBF1-204ENST00000395756 CDK5Q00535 292 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 MGAT2Q10469 447 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 ZNF404Q494X3 552 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 FLYWCH1Q4VC44 716 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 PDZK1Q5T2W1 519 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 COL13A1Q5TAT6 717 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-204ENST00000395756 SIGIRRQ6IA17 410 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 PRSS58Q8IYP2 241 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 ZNF619Q8N2I2 560 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 OR52I1Q8NGK6 324 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 OR4Q3Q8NH05 313 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 RNFT2Q96EX2 444 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 SPACA7Q96KW9 195 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 DACH2Q96NX9 599 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 OPALINQ96PE5 141 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 NDOR1Q9UHB4 597 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 DAPK2Q9UIK4 370 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 IGHV5-51A0A0C4DH38 117 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 DSCR3O14972 297 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 SLITRK5O94991 958 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 CBX7O95931 251 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 ZNF136P52737 540 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 TUBA1BP68363 451 aa16.61■□□□□ 0.25
SREBF1-204ENST00000395756 TSPAN31Q12999 210 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms