RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 SLC6A11P48066 632 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 PXNP49023 591 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 PUS10Q3MIT2 529 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 AMZ1Q400G9 498 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 C2orf27AQ580R0 203 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 C1orf94Q6P1W5 598 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 FIGNL1Q6PIW4 674 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 ADAMTSL4Q6UY14 1074 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 PRICKLE2Q7Z3G6 844 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 C12orf76Q8N812 135 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 KCT2Q8NC54 265 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 TNFAIP8L1Q8WVP5 186 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 KCTD12Q96CX2 325 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 INSM2Q96T92 566 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 FKBP14Q9NWM8 211 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 BAIAP2Q9UQB8 552 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 ZNF443Q9Y2A4 671 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 SSX4O60224 188 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 LCN1P31025 176 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 NAA10P41227 235 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 DPTQ07507 201 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 DECR1Q16698 335 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 MEPCEQ7L2J0 689 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 CYB561A3Q8NBI2 242 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 MOSPD2Q8NHP6 518 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 DNAJA4Q8WW22 397 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 SMARCD2Q92925 531 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 GAL3ST3Q96A11 431 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 SLC7A5P2Q9GIP4 190 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 NXF2Q9GZY0 626 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 OR52A5Q9H2C5 316 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 TTYH1Q9H313 450 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 SLC25A19Q9HC21 320 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 BCL2L10Q9HD36 194 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 MGAT4AQ9UM21 535 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 ANKRD36A6QL64 1941 aa10.93□□□□□ -0.66
UBE2D3-209ENST00000394804 HIDE1A8MVS5 230 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 PTBP1P26599 531 aaKnown RBP eCLIP10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 MNDAP41218 407 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 P2RY2P41231 377 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 ACTA2P62736 377 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 ACTG2P63267 376 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 ZXDCQ2QGD7 858 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 PRRT3Q5FWE3 981 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 PRAMEF8Q5VWM4 474 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 PRAMEF7Q5VXH5 474 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 HBMQ6B0K9 141 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 ZNF563Q8TA94 476 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 C15orf40Q8WUR7 153 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 HERVK_113Q902F9 699 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 LINC00615Q96LM1 132 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 COMMD4Q9H0A8 199 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 CRISPLD2Q9H0B8 497 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 TAS2R10Q9NYW0 307 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 PFDN2Q9UHV9 154 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 ATG4BQ9Y4P1 393 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 RANBP2P49792 3224 aaKnown RBP10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 RNF13O43567 381 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 RFPL3O75679 317 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 HLA-DMAP28067 261 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 CCR2P41597 374 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 GPR50Q13585 617 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 GAS6Q14393 721 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 PPP2R2DQ66LE6 453 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 MBOAT2Q6ZWT7 520 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 OR2L8Q8NGY9 312 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 GINS4Q9BRT9 223 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 MED18Q9BUE0 208 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 TRIM2Q9C040 744 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 FGF20Q9NP95 211 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 INPP5EQ9NRR6 644 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 NDOR1Q9UHB4 597 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 TRBV2A0A0J9YWF9 115 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 A0A1B0GVC2 190 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 GXYLT2A0PJZ3 443 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 A6NIN4 97 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 WASHC1A8K0Z3 465 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 SOCS6O14544 535 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 LRRTM2O43300 516 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 CHRM4P08173 479 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 POLR2CP19387 275 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 PRKAR1BP31321 381 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 BMPR1AP36894 532 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 CTBP2P56545 445 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 TMEM52BQ4KMG9 183 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 METRNLQ641Q3 311 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 C18orf63Q68DL7 685 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 LIN54Q6MZP7 749 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 B3GLCTQ6Y288 498 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 RTL10Q7L3V2 364 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 HSPA12BQ96MM6 686 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 PIGUQ9H490 435 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 WASH6PQ9NQA3 447 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 TM7SF3Q9NS93 570 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 GPATCH2Q9NW75 528 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 KCND3Q9UK17 655 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 SLC6A14Q9UN76 642 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 A4GNTQ9UNA3 340 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 NUBP2Q9Y5Y2 271 aa10.92□□□□□ -0.66
UBE2D3-209ENST00000394804 TSPAN11A1L157 253 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms