RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 NDUFB5O43674 189 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 CRCPO75575 148 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 HSPA4LO95757 839 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 PROCP04070 461 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 THBDP07204 575 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 PSMA4P25789 261 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 EIF1AXP47813 144 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 CTU2Q2VPK5 515 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 STAC2Q6ZMT1 411 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 BEND4Q6ZU67 534 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 ESPNLQ6ZVH7 1005 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 PLEKHM3Q6ZWE6 761 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 ZNF551Q7Z340 670 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 EXOC3L1Q86VI1 746 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 CIARTQ8N365 385 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 OR6Y1Q8NGX8 325 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 OR4C3Q8NH37 302 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 OR10D3Q8NH80 312 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 ZFP28Q8NHY6 868 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 GPR151Q8TDV0 419 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 TRIM44Q96DX7 344 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 ZBED6CLQ96FA7 236 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 EGLN2Q96KS0 407 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 CCT7Q99832 543 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 PRRG4Q9BZD6 226 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 KLHL4Q9C0H6 718 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 ACSS1Q9NUB1 689 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 ZNF701Q9NV72 531 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 C1orf109Q9NX04 203 aa15.67■□□□□ 0.1
SNRPA1-202ENST00000394082 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 A0A1W2PQD3 144 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 GXYLT2A0PJZ3 443 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 EIF1AYO14602 144 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 PDPK1O15530 556 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 SEC22BO75396 215 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 OXSR1O95747 527 aaPredicted RBP15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 PLGP00747 810 aaPredicted RBP15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 PSMB1P20618 241 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 SLC6A8P48029 635 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 RFX3P48380 749 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 CCT5P48643 541 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 CTBP2P56545 445 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 PDE7AQ13946 482 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 CFAP157Q5JU67 520 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 CPTPQ5TA50 214 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 GTF2IRD2BQ6EKJ0 949 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 GTF2IRD2Q86UP8 949 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 NUDT8Q8WV74 236 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 PIK3R3Q92569 461 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 GIMAP5Q96F15 307 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 PERPQ96FX8 193 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 MS4A4EQ96PG1 132 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 TMEM204Q9BSN7 226 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 REEP4Q9H6H4 257 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 PPCSQ9HAB8 311 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 UBQLN4Q9NRR5 601 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 OXSMQ9NWU1 459 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 VDAC3Q9Y277 283 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 GPR52Q9Y2T5 361 aa15.66■□□□□ 0.1
SNRPA1-202ENST00000394082 A0A1W2PRB8 838 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 RGS14O43566 566 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 PLIN3O60664 434 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 KCNK2O95069 426 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 NEFHP12036 1026 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 CRHR1P34998 444 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 GPC1P35052 558 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 EIF1P41567 113 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 SERPINB4P48594 390 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 PTH2RP49190 550 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 HSPB3Q12988 150 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 MLC1Q15049 377 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 PLPPR5Q32ZL2 321 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 EXOSC6Q5RKV6 272 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 PDSS1Q5T2R2 415 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 STK32CQ86UX6 486 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 TRABD2AQ86V40 505 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 ZNF611Q8N823 705 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 NUP43Q8NFH3 380 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 OR2V1Q8NHB1 315 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 MTERF3Q96E29 417 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 ZC3HAV1LQ96H79 300 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 TRMOQ9BU70 441 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 CXorf56Q9H5V9 222 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 LRTM1Q9HBL6 345 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 GP6Q9HCN6 339 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 TNFRSF12AQ9NP84 129 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 EQTNQ9NQ60 294 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 MED17Q9NVC6 651 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 GIN1Q9NXP7 522 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 TMED5Q9Y3A6 229 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 HIVEP2P31629 2446 aa15.65■□□□□ 0.1
SNRPA1-202ENST00000394082 JMJD1CQ15652 2540 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 A0A1W2PPM1 405 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 SOX30O94993 753 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 SYNGR4O95473 234 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 PABPC4LP0CB38 370 aaKnown RBP15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 NID1P14543 1247 aa15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 DDX5P17844 614 aaKnown RBP15.64■□□□□ 0.09
SNRPA1-202ENST00000394082 ME2P23368 584 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms