RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ALG1L2C9J202 215 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 H0Y3Z8 333 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 UBDO15205 165 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 POLR3GO15318 223 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 NDUFB5O43674 189 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 FCMRO60667 390 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 WDR1O75083 606 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 TNFRSF21O75509 655 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 TOXO94900 526 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 CLDN14O95500 239 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 OR12D1P0DN82 309 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 IDO1P14902 403 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 ATP6V1C1P21283 382 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 TBXA2RP21731 343 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 UQCRC2P22695 453 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 HTR1EP28566 365 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 SRD5A2P31213 254 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 CHI3L1P36222 383 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 CLK3P49761 638 aaKnown RBP6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 GFRA1P56159 465 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 B3GALT5-AS1P59052 145 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 FUT5Q11128 374 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 GPR68Q15743 365 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 DPY19L1Q2PZI1 675 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 ACSF3Q4G176 576 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 FLYWCH1Q4VC44 716 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 NHSL2Q5HYW2 709 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 COX20Q5RI15 118 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 RAET1LQ5VY80 246 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 SAXO2Q658L1 398 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 VASNQ6EMK4 673 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 SLC2A7Q6PXP3 512 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF621Q6ZSS3 439 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 ACAD11Q709F0 780 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 RNF130Q86XS8 419 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 LIX1LQ8IVB5 337 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 UBQLNLQ8IYU4 475 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 MIER2Q8N344 545 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF614Q8N883 585 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 NAXEQ8NCW5 288 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 TNIP2Q8NFZ5 429 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 SMPDL3BQ92485 455 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 RND1Q92730 232 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 WNT2BQ93097 391 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 MOAP1Q96BY2 351 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 C1GALT1C1Q96EU7 318 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 CCDC115Q96NT0 180 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 PANX1Q96RD7 426 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 TRIB1Q96RU8 372 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 TUBA1CQ9BQE3 449 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 G6PC3Q9BUM1 346 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 PRDM14Q9GZV8 571 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 NPHS2Q9NP85 383 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 TCF7L2Q9NQB0 619 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 SDR39U1Q9NRG7 319 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 BTNL2Q9UIR0 455 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 KCNE5Q9UJ90 142 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 DCTN4Q9UJW0 460 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 VDAC3Q9Y277 283 aa6.95□□□□□ -1.3
HMGB3P1-201ENST00000393368 CSMD1Q96PZ7 3565 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZGRF1Q86YA3 2104 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 H3BML4 177 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 NR5A2O00482 541 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 SCDO00767 359 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 SEC14L5O43304 696 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 HCRTR2O43614 444 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 BCAS1O75363 584 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 OPN1LWP04000 364 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 KRT16P08779 473 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 HPGDP15428 266 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 LHX2P50458 406 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 POLR2JP52435 117 aaKnown RBP6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 AGFG1P52594 562 aaKnown RBP6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 DSCR4P56555 118 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 CLDN18P56856 261 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF117Q03924 483 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 C17orf67Q0P5P2 114 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 ART3Q13508 389 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 MAPK14Q16539 360 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 GSTA3Q16772 222 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF630Q2M218 657 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 PDZK1Q5T2W1 519 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 SP5Q6BEB4 398 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 TMEM211Q6ICI0 200 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 BHLHB9Q6PI77 547 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 XKRXQ6PP77 449 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 CBLN3Q6UW01 205 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 C16orf62Q7Z3J2 963 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 EID3Q8N140 333 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 ANKFN1Q8N957 763 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 C9orf106Q8NAJ2 232 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 VPS37AQ8NEZ2 397 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 GOT1L1Q8NHS2 421 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 PHOSPHO1Q8TCT1 267 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 CA5BP1Q8WTZ4 195 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 XAGE5Q8WWM1 108 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF524Q96C55 264 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 NEURL3Q96EH8 262 aa6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 AURKBQ96GD4 344 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P1-201ENST00000393368 SDF2Q99470 211 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms