RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 PEBP1P30086 187 aaKnown RBP9.02□□□□□ -0.97
COL6A3-204ENST00000392003 AVPR1BP47901 424 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 PCP4P48539 62 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 AKR1D1P51857 326 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 KIAA1024LP59773 190 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 PPP2CBP62714 309 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 PPP2CAP67775 309 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 CCDC85BQ15834 202 aaPredicted RBP9.02□□□□□ -0.97
COL6A3-204ENST00000392003 ENTPD8Q5MY95 495 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 SLC36A4Q6YBV0 504 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 PAQR7Q86WK9 346 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 LYSMD2Q8IV50 215 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 LRRC25Q8N386 305 aaPredicted RBP9.02□□□□□ -0.97
COL6A3-204ENST00000392003 PARP16Q8N5Y8 322 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 OR4K14Q8NGD5 310 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 ZCCHC10Q8TBK6 192 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 QRSL1Q9H0R6 528 aaKnown RBP9.02□□□□□ -0.97
COL6A3-204ENST00000392003 CPNE5Q9HCH3 593 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 KRCC1Q9NPI7 259 aaPredicted RBP9.02□□□□□ -0.97
COL6A3-204ENST00000392003 STUB1Q9UNE7 303 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 ALPK3Q96L96 1907 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 CKAP5Q14008 2032 aa9.02□□□□□ -0.97
COL6A3-204ENST00000392003 C4orf51C9J302 202 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 SULT1B1O43704 296 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 B3GALT2O43825 422 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 PTP4A3O75365 173 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 ZNF888P0CJ79 500 aaPredicted RBP9.01□□□□□ -0.97
COL6A3-204ENST00000392003 AK4P27144 223 aaPredicted RBP9.01□□□□□ -0.97
COL6A3-204ENST00000392003 AKT2P31751 481 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 SOX3P41225 446 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 MRPS21P82921 87 aaKnown RBP9.01□□□□□ -0.97
COL6A3-204ENST00000392003 MLLT11Q13015 90 aaPredicted RBP9.01□□□□□ -0.97
COL6A3-204ENST00000392003 LARS2Q15031 903 aaKnown RBP9.01□□□□□ -0.97
COL6A3-204ENST00000392003 BCDIN3DQ7Z5W3 292 aaKnown RBP9.01□□□□□ -0.97
COL6A3-204ENST00000392003 VRK2Q86Y07 508 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 PHC2Q8IXK0 858 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 NANOGP1Q8N7R0 232 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 KCT2Q8NC54 265 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 OR52P1PQ8NH57 321 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 OR1E3Q8WZA6 343 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 MOGAT1Q96PD6 335 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 FUZQ9BT04 418 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 RPRD1BQ9NQG5 326 aaKnown RBP9.01□□□□□ -0.97
COL6A3-204ENST00000392003 NUP50Q9UKX7 468 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 CES1P1Q9UKY3 287 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 KCNE3Q9Y6H6 103 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 DOCK9Q9BZ29 2069 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 STK25O00506 426 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 DYRK3O43781 588 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 GPX5O75715 221 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 CCNKO75909 580 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 KCNK2O95069 426 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 GTF2E2P29084 291 aaKnown RBP9.01□□□□□ -0.97
COL6A3-204ENST00000392003 RORCP51449 518 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 DUSP2Q05923 314 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 NFATC4Q14934 902 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 KIR2DS3Q14952 304 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 SSX1Q16384 188 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 SYT14P1Q58G82 188 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 PRRT3Q5FWE3 981 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 ACSM5Q6NUN0 579 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 BTN2A1Q7KYR7 527 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 LAPTM4BQ86VI4 370 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 OR10G6Q8NH81 332 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 SNAPC3Q92966 411 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 MCHR1Q99705 422 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 RSPO3Q9BXY4 272 aaPredicted RBP9.01□□□□□ -0.97
COL6A3-204ENST00000392003 SLC38A1Q9H2H9 487 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 HHATLQ9HCP6 504 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 H2AFY2Q9P0M6 372 aaPredicted RBP9.01□□□□□ -0.97
COL6A3-204ENST00000392003 SPATA2Q9UM82 520 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 ERVK-19Q9WJR5 959 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 PCDHGB6Q9Y5F9 930 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 A0A087WUU8 490 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 FRS3O43559 492 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 KRT8P05787 483 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 HPGDP15428 266 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 FUT5Q11128 374 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 TSPAN31Q12999 210 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 LTB4RQ15722 352 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 CFAP77Q6ZQR2 320 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 SPATC1Q76KD6 591 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 ATCAYQ86WG3 371 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 OR8H2Q8N162 312 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 CAMKVQ8NCB2 501 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 FAM3CQ92520 227 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 TXNDC15Q96J42 360 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 MRGPRX1Q96LB2 322 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 ZNF582Q96NG8 517 aaPredicted RBP9.01□□□□□ -0.97
COL6A3-204ENST00000392003 MS4A4EQ96PG1 132 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 SERINC2Q96SA4 455 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 GABRG3Q99928 467 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 SLC30A2Q9BRI3 323 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 SAP130Q9H0E3 1048 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 SNTG1Q9NSN8 517 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 WDR45Q9Y484 360 aa9.01□□□□□ -0.97
COL6A3-204ENST00000392003 A0A075B6Q4 140 aa9□□□□□ -0.97
COL6A3-204ENST00000392003 H0Y8X5 98 aa9□□□□□ -0.97
COL6A3-204ENST00000392003 CTDSP2O14595 271 aa9□□□□□ -0.97
COL6A3-204ENST00000392003 PRODHO43272 600 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms