RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 NEUROD4Q9HD90 331 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 SIRT3Q9NTG7 399 aaPredicted RBP13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 KLHL28Q9NXS3 571 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 PPIL1Q9Y3C6 166 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 TRAV27A0A087WT01 109 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 PRRT4C9JH25 899 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 PROM1O43490 865 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 GMFGO60234 142 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 TBX6O95947 436 aaPredicted RBP13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 ALDOBP05062 364 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 SOX9P48436 509 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 DUSP2Q05923 314 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 EXOSC2Q13868 293 aaKnown RBP13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 OCLNQ16625 522 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 GXYLT1Q4G148 440 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 C3orf38Q5JPI3 329 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 OTPQ5XKR4 325 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 METTL3Q86U44 580 aaKnown RBP13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 SHISA5Q8N114 240 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 ARRDC3Q96B67 414 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 HCN3Q9P1Z3 774 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 SLC7A7Q9UM01 511 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 NARSO43776 548 aaKnown RBP13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 DPM1O60762 260 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 ACADMP11310 421 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 CERS1P27544 350 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 PSMB10P40306 273 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 PXNP49023 591 aaPredicted RBP13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 SNTB2Q13425 540 aaKnown RBP13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 TPBGQ13641 420 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 ENTPD8Q5MY95 495 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 HES5Q5TA89 166 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 ZBTB37Q5TC79 503 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 CREB3L2Q70SY1 520 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 C17orf47Q8NEP4 570 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 OR8K3Q8NH51 312 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 GOT1L1Q8NHS2 421 aaPredicted RBP13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 LMLNQ96KR4 655 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 TESQ9UGI8 421 aaKnown RBP13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 KCND3Q9UK17 655 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 EXOSC1Q9Y3B2 195 aaKnown RBP13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 SF3B6Q9Y3B4 125 aaKnown RBP13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 ATG4BQ9Y4P1 393 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 DSPPQ9NZW4 1301 aa13.6□□□□□ -0.23
LRRFIP1-204ENST00000392000 CDC42EP2O14613 210 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 SLC43A1O75387 559 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 TCRBP04435 133 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 UCHL1P09936 223 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 ITGB8P26012 769 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 PITPNBP48739 271 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 AGERQ15109 404 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 ZNF613Q6PF04 617 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 ALKAL2Q6UX46 152 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 CAMKMTQ7Z624 323 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 AMZ2Q86W34 360 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 ACBD7Q8N6N7 88 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 SPERTQ8NA61 448 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 RFKQ969G6 155 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 UBE2E3Q969T4 207 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 MRGPRX3Q96LB0 322 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 DDOQ99489 341 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 DHRS9Q9BPW9 319 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 NIPAL2Q9H841 368 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 SLC35C2Q9NQQ7 365 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 LOC105371267A0A1B0GV96 52 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 SOX30O94993 753 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 SIX6O95475 246 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 MAT2AP31153 395 aaKnown RBP13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 TEX261Q6UWH6 196 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 CXorf40BQ96DE9 158 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 C4orf36Q96KX1 117 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 MARVELD1Q9BSK0 173 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 BTBD1Q9H0C5 482 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 KCNN3Q9UGI6 736 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 SCML1Q9UN30 329 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 PCDHGB7Q9Y5F8 929 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 U3KQ87 197 aa13.59□□□□□ -0.23
LRRFIP1-204ENST00000392000 CHST10O43529 356 aa13.58□□□□□ -0.23
LRRFIP1-204ENST00000392000 FZD7O75084 574 aa13.58□□□□□ -0.23
LRRFIP1-204ENST00000392000 KDM4BO94953 1096 aa13.58□□□□□ -0.23
LRRFIP1-204ENST00000392000 PAK4O96013 591 aaPredicted RBP13.58□□□□□ -0.23
LRRFIP1-204ENST00000392000 TRAPPC2P0DI81 140 aa13.58□□□□□ -0.23
LRRFIP1-204ENST00000392000 TRAPPC2BP0DI82 140 aa13.58□□□□□ -0.23
LRRFIP1-204ENST00000392000 PDE7AQ13946 482 aa13.58□□□□□ -0.23
LRRFIP1-204ENST00000392000 MINDY4Q4G0A6 757 aa13.58□□□□□ -0.23
LRRFIP1-204ENST00000392000 RGMAQ96B86 450 aa13.58□□□□□ -0.23
LRRFIP1-204ENST00000392000 DTD2Q96FN9 168 aa13.58□□□□□ -0.23
LRRFIP1-204ENST00000392000 SEC22CQ9BRL7 303 aa13.58□□□□□ -0.23
LRRFIP1-204ENST00000392000 FUZQ9BT04 418 aa13.58□□□□□ -0.23
LRRFIP1-204ENST00000392000 TRDV1A0A1B0GX56 115 aa13.58□□□□□ -0.24
LRRFIP1-204ENST00000392000 RPP14O95059 124 aaKnown RBP13.58□□□□□ -0.24
LRRFIP1-204ENST00000392000 EPCAMP16422 314 aa13.58□□□□□ -0.24
LRRFIP1-204ENST00000392000 IFNGR2P38484 337 aa13.58□□□□□ -0.24
LRRFIP1-204ENST00000392000 PER3P56645 1201 aa13.58□□□□□ -0.24
LRRFIP1-204ENST00000392000 KIAA1024LP59773 190 aa13.58□□□□□ -0.24
LRRFIP1-204ENST00000392000 PRPF38BQ5VTL8 546 aaKnown RBP13.58□□□□□ -0.24
LRRFIP1-204ENST00000392000 RASSF6Q6ZTQ3 369 aa13.58□□□□□ -0.24
LRRFIP1-204ENST00000392000 BMPERQ8N8U9 685 aa13.58□□□□□ -0.24
LRRFIP1-204ENST00000392000 SLC16A11Q8NCK7 471 aa13.58□□□□□ -0.24
LRRFIP1-204ENST00000392000 OTUB2Q96DC9 234 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms