RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ULK4Q96C45 1275 aa0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 MRPL53Q96EL3 112 aaKnown RBP0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 TMEM80Q96HE8 168 aa0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 APOOQ9BUR5 198 aa0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 RNF126Q9BV68 326 aa0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 CHIAQ9BZP6 476 aa0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 POLR2J2Q9GZM3 115 aaKnown RBP0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 POLR2J3Q9H1A7 115 aaKnown RBP0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 ZDHHC6Q9H6R6 413 aa0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 ANKMY1Q9P2S6 941 aa0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 GNPTGQ9UJJ9 305 aa0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 CACNA1DQ01668 2161 aa0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 BAHCC1Q9P281 2608 aa0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 PASKQ96RG2 1323 aa0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 METP08581 1390 aa0.03□□□□□ -2.4
RNU6-239P-201ENST00000390990 ZSWIM8A7E2V4 1837 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 AHCYL1O43865 530 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 ZNF780AO75290 641 aaPredicted RBP0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 SNAPINO95295 136 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 IGSF6O95976 241 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 RPN1P04843 607 aaKnown RBP0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 VIMP08670 466 aaKnown RBP0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 POLR2MP0CAP2 368 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 PPIAL4GP0DN37 164 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 CCNA2P20248 432 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 TGFBR1P36897 503 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 NMUP48645 174 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 STK19P49842 368 aaPredicted RBP0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 RPS6P62753 249 aaKnown RBP0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 AIMP1Q12904 312 aaKnown RBP0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 BNIP1Q12981 228 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 BAMBIQ13145 260 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 CAMK2DQ13557 499 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 ARFRP1Q13795 201 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 COG2Q14746 738 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 ACKR1Q16570 336 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 RTL6Q6ICC9 239 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 HCP5Q6MZN7 132 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 ZNF621Q6ZSS3 439 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 ARMCX2Q7L311 632 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 SPATA21Q7Z572 469 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 ADCK2Q7Z695 626 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 THEM5Q8N1Q8 247 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 PYROXD2Q8N2H3 581 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 FAM86B1Q8N7N1 296 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 RPGRIP1Q96KN7 1286 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 MAGT1Q9H0U3 335 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 CDC42EP4Q9H3Q1 356 aaKnown RBP0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 CAB39LQ9H9S4 337 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 SLCO1C1Q9NYB5 712 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 C5AR2Q9P296 337 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 DCDC2Q9UHG0 476 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 TEKT2Q9UIF3 430 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 BTNL2Q9UIR0 455 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 ADGRL1O94910 1474 aa0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 LAMB2P55268 1798 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 SAGE2PA6NJ88 616 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 SULT2B1O00204 365 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 WDR46O15213 610 aaKnown RBP0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 AKAP3O75969 853 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 CDRT1O95170 752 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 SLC4A1P02730 911 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 PNMA6AP0CW24 399 aaPredicted RBP0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 PGAM1P18669 254 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 DHPSP49366 369 aaPredicted RBP0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 PPP5CP53041 499 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 CLNS1AP54105 237 aaKnown RBP0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 EWSR1Q01844 656 aaKnown RBP eCLIP0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 SLC34A1Q06495 639 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 RAB35Q15286 201 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 KRT80Q6KB66 452 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 MZT2BQ6NZ67 158 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 PODNL1Q6PEZ8 512 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 C6orf89Q6UWU4 347 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 RFLNAQ6ZTI6 216 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 ERN2Q76MJ5 926 aaKnown RBP0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 PRSS41Q7RTY9 318 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 DZIP1Q86YF9 867 aaKnown RBP0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 AQP12AQ8IXF9 295 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 PGAM4Q8N0Y7 254 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 COLGALT1Q8NBJ5 622 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 SIDT2Q8NBJ9 832 aaKnown RBP0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 GGHQ92820 318 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 ATP6V0A1Q93050 837 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 LRRC58Q96CX6 371 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 ACPTQ9BZG2 426 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 LHX5Q9H2C1 402 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 CCDC68Q9H2F9 335 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 DDX28Q9NUL7 540 aaKnown RBP0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 SWAP70Q9UH65 585 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 NRBP1Q9UHY1 535 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 PURGQ9UJV8 347 aaKnown RBP0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 EXOC7Q9UPT5 735 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 KLHDC2Q9Y2U9 406 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 FRMPD3Q5JV73 1810 aa0.01□□□□□ -2.41
RNU6-239P-201ENST00000390990 A0A0A6YYC8 382 aaPredicted RBP0□□□□□ -2.41
RNU6-239P-201ENST00000390990 ANKRD18BA2A2Z9 1011 aa0□□□□□ -2.41
RNU6-239P-201ENST00000390990 LRIT2A6NDA9 550 aa0□□□□□ -2.41
RNU6-239P-201ENST00000390990 SDR42E2A6NKP2 422 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms