RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 KIR2DS5Q14953 304 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 NCF4Q15080 339 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 CELF3Q5SZQ8 465 aaKnown RBP5.72□□□□□ -1.49
TRAV35-201ENST00000390462 OTUD3Q5T2D3 398 aaPredicted RBP5.72□□□□□ -1.49
TRAV35-201ENST00000390462 SPECC1LQ69YQ0 1117 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 TWF2Q6IBS0 349 aaKnown RBP5.72□□□□□ -1.49
TRAV35-201ENST00000390462 OR4C11Q6IEV9 310 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 SLC8B1Q6J4K2 584 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 TMEM184AQ6ZMB5 413 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 NDUFAF7Q7L592 441 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 ST13P4Q8IZP2 240 aaPredicted RBP5.72□□□□□ -1.49
TRAV35-201ENST00000390462 RNF113BQ8IZP6 322 aaKnown RBP5.72□□□□□ -1.49
TRAV35-201ENST00000390462 CLEC4FQ8N1N0 589 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 CENPSQ8N2Z9 138 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 CLIP4Q8N3C7 705 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 Q8N9G6 341 aaPredicted RBP5.72□□□□□ -1.49
TRAV35-201ENST00000390462 POC1AQ8NBT0 407 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 CHDHQ8NE62 594 aaPredicted RBP5.72□□□□□ -1.49
TRAV35-201ENST00000390462 OR5T3Q8NGG3 340 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 OR52N5Q8NH56 324 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 IL17DQ8TAD2 202 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 LRRC15Q8TF66 581 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 MTBPQ96DY7 904 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 UQCC2Q9BRT2 126 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 TTYH2Q9BSA4 534 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 DCTN5Q9BTE1 182 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 SSBP3Q9BWW4 388 aaPredicted RBP5.72□□□□□ -1.49
TRAV35-201ENST00000390462 CXXC4Q9H2H0 198 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 PXMP2Q9NR77 195 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 SYBUQ9NX95 663 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 SMARCAL1Q9NZC9 954 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 STOX2Q9P2F5 926 aaPredicted RBP5.72□□□□□ -1.49
TRAV35-201ENST00000390462 IL36RNQ9UBH0 155 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 GHRLQ9UBU3 117 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 FBXL4Q9UKA2 621 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 POMT2Q9UKY4 750 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 TIMM10BQ9Y5J6 103 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 ATP6V1DQ9Y5K8 247 aa5.72□□□□□ -1.49
TRAV35-201ENST00000390462 C4AP0C0L4 1744 aa5.71□□□□□ -1.49
TRAV35-201ENST00000390462 IGHV4-28A0A0C4DH34 117 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 LILRA5A6NI73 299 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 CRTAPO75718 401 aaPredicted RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 KRT33AO76009 404 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 IGF1P05019 195 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 MBL2P11226 248 aaPredicted RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 FGF5P12034 268 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 CCL2P13500 99 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 MYOD1P15172 320 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 S100A5P33763 92 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 PTGS2P35354 604 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 HPCAL1P37235 193 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 TMPOP42166 694 aaKnown RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 MAGEA5P43359 124 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 GYG1P46976 350 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 B3GALT5-AS1P59052 145 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 SEC61A1P61619 476 aaKnown RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 MRPS15P82914 257 aaKnown RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 ZP4Q12836 540 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 C1orf61Q13536 156 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 RBM39Q14498 530 aaKnown RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 ITIH4Q14624 930 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 EFHC1Q5JVL4 640 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 LY6G5CQ5SRR4 150 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 SLX4IPQ5VYV7 408 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 CCDC137Q6PK04 289 aaKnown RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 PARM1Q6UWI2 310 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 UNQ6126/PRO20091Q6UXV3 157 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 HSDL2Q6YN16 418 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 CCNI2Q6ZMN8 369 aaPredicted RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 SMIM5Q71RC9 77 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 TRMT10CQ7L0Y3 403 aaKnown RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 COPS6Q7L5N1 327 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 ANKRD37Q7Z713 158 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 AMIGO2Q86SJ2 522 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 ITIH5Q86UX2 942 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 RANBP3LQ86VV4 465 aaPredicted RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 KCNMB4Q86W47 210 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 TMEM17Q86X19 198 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 CACUL1Q86Y37 369 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 PYROXD2Q8N2H3 581 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 FGFRL1Q8N441 504 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 FAM86B1Q8N7N1 296 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 DNAAF3Q8N9W5 541 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 SDR9C7Q8NEX9 313 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 PROKR2Q8NFJ6 384 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 OR1L6Q8NGR2 347 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 OR13C9Q8NGT0 318 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 SMPDL3AQ92484 453 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 ABTB1Q969K4 478 aaPredicted RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 ASB9Q96DX5 294 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 LURAP1Q96LR2 239 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 ZNF578Q96N58 590 aaPredicted RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 CSF3RQ99062 836 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 MLST8Q9BVC4 326 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 OR52A5Q9H2C5 316 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 GPN2Q9H9Y4 310 aaPredicted RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 S100A14Q9HCY8 104 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 MRPL47Q9HD33 250 aaKnown RBP5.71□□□□□ -1.5
TRAV35-201ENST00000390462 FGF21Q9NSA1 209 aa5.71□□□□□ -1.5
TRAV35-201ENST00000390462 WWOXQ9NZC7 414 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms