RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 GCGRP47871 477 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 NNATQ16517 81 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 RPE65Q16518 533 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 BAK1Q16611 211 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 KLHL22Q53GT1 634 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 CDC73Q6P1J9 531 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 GLRX5Q86SX6 157 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 ATCAYQ86WG3 371 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 PROKR2Q8NFJ6 384 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 OR51A7Q8NH64 312 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 ZFPM2Q8WW38 1151 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 PATE1Q8WXA2 126 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 SAMD8Q96LT4 415 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 TPSD1Q9BZJ3 242 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 TXNL4BQ9NX01 149 aaKnown RBP11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 MMP17Q9ULZ9 603 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 MRPS7Q9Y2R9 242 aaKnown RBP11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 CMAHPQ9Y471 501 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 CCDC182A6NF36 153 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 PTTG1O95997 202 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 TLX1P31314 330 aaPredicted RBP11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 HTR2BP41595 481 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 LIMS1P48059 325 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 RHAGQ02094 409 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 PRRT3Q5FWE3 981 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 ENTPD8Q5MY95 495 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 DDI2Q5TDH0 399 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 FAM205BPQ63HN1 556 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 SLC36A4Q6YBV0 504 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 KLBQ86Z14 1044 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 TMEM255BQ8WV15 326 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 FAM131CQ96AQ9 280 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 SLC6A18Q96N87 628 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 CCDC3Q9BQI4 270 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 PHF7Q9BWX1 381 aaPredicted RBP11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 DPH1Q9BZG8 443 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 SP140LQ9H930 580 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 ZNF221Q9UK13 617 aa11.29□□□□□ -0.6
CAPRIN1-202ENST00000389645 A0A0A6YYD5 115 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 A0A1W2PPK0 400 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 REM1O75628 298 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 WNT4P56705 351 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 CD83Q01151 205 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 SCN1BQ07699 218 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 PCDH1Q08174 1060 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 EOGTQ5NDL2 527 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 MEDAGQ5VYS4 303 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 PLBD1Q6P4A8 553 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 FAM111BQ6SJ93 734 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 PARGQ86W56 976 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 CPOQ8IVL8 374 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 BBS1Q8NFJ9 593 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 SMAP2Q8WU79 429 aaPredicted RBP11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 RNF31Q96EP0 1072 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 BARHL1Q9BZE3 327 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 HDHD2Q9H0R4 259 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 KCND3Q9UK17 655 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 SLC7A7Q9UM01 511 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 CLCA3PQ9Y6N3 262 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 A0A1W2PRQ8 180 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 ATP6V1G2-DDX39BF2Z307 99 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 ALX3O95076 343 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 LGI1O95970 557 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 TYRP1P17643 537 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 SNRPGP62308 76 aaKnown RBP11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 LARS2Q15031 903 aaKnown RBP11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 NXNL2Q5VZ03 156 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 NANOGP1Q8N7R0 232 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 COX18Q8N8Q8 333 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 CYB561A3Q8NBI2 242 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 ATP6V1C2Q8NEY4 427 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 CREB3L4Q8TEY5 395 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 TMCO6Q96DC7 493 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 ELP4Q96EB1 424 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 TRHRP34981 398 aaPredicted RBP11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 SLC9A3P48764 834 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 COX10Q12887 443 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 SMAD4Q13485 552 aaKnown RBP11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 DEFB110Q30KQ9 67 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 TMEM35AQ53FP2 167 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 CCDC28AQ8IWP9 274 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 AICDAQ9GZX7 198 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 TCEAL2Q9H3H9 227 aaPredicted RBP11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 RPRD1BQ9NQG5 326 aaKnown RBP11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 PRDM7Q9NQW5 492 aa11.28□□□□□ -0.6
CAPRIN1-202ENST00000389645 DMDP11532 3685 aa11.27□□□□□ -0.6
CAPRIN1-202ENST00000389645 A0A0G2JPF8 293 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 HNRNPCL2B2RXH8 293 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 HNRNPCL3B7ZW38 293 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 SOCS6O14544 535 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 PRODHO43272 600 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 SEMA4FO95754 770 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 HNRNPCL4P0DMR1 293 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 PSKH1P11801 424 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 IL7P13232 177 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 GSTM3P21266 225 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 CASP3P42574 277 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 GAS6Q14393 721 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 IRF3Q14653 427 aa11.27□□□□□ -0.61
CAPRIN1-202ENST00000389645 ZFP69Q49AA0 526 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms