RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 C3orf56Q8N813 242 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ZNF713Q8N859 430 aaPredicted RBP-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 C9orf163Q8N9P6 203 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SLC43A3Q8NBI5 491 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ZNF740Q8NDX6 193 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 OR8K1Q8NGG5 319 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 OR5L1Q8NGL2 311 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TGFBRAP1Q8WUH2 860 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SDR42E1Q8WUS8 393 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 WDR60Q8WVS4 1066 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 UCN3Q969E3 161 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TAMM41Q96BW9 452 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TM4SF19Q96DZ7 209 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 C4orf45Q96LM5 186 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 EIF3CQ99613 913 aaKnown RBP-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TXN2Q99757 166 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 MXRA8Q9BRK3 442 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 DHRS4Q9BTZ2 278 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 OSBPL10Q9BXB5 764 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 GPR63Q9BZJ6 419 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 VN1R1Q9GZP7 353 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 AZI2Q9H6S1 392 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SLC24A3Q9HC58 644 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ZNF302Q9NR11 478 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 DEC1Q9P2X7 70 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 C19orf25Q9UFG5 118 aaPredicted RBP-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ACOT9Q9Y305 439 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PPIL1Q9Y3C6 166 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 MRPS23Q9Y3D9 190 aaKnown RBP-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 HBS1LQ9Y450 684 aaKnown RBP-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 CFAP20Q9Y6A4 193 aaKnown RBP-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PLXND1Q9Y4D7 1925 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 DMDP11532 3685 aa-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SPTBN5Q9NRC6 3674 aaKnown RBP-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 MAP2P11137 1827 aaKnown RBP-2.86□□□□□ -2.87
RNU6-1340P-201ENST00000384438 FREM2Q5SZK8 3169 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TRBV5-5A0A0J9YX44 114 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 BTN3A1O00481 513 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TM9SF1O15321 606 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PPM1GO15355 546 aaPredicted RBP-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SLC31A1O15431 190 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 OR2T1O43869 369 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ZNF254O75437 659 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SUPT3HO75486 399 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SKAP2O75563 359 aaPredicted RBP-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 LUC7L3O95232 432 aaKnown RBP-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SLU7O95391 586 aaKnown RBP-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TRGV3P03979 118 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 DNTTP04053 509 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 RPLP2P05387 115 aaKnown RBP-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 CECR9P0C854 216 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 MYBL2P10244 700 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 UROSP10746 265 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ZNF708P17019 499 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TPH1P17752 444 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 GPX2P18283 190 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 IDSP22304 550 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ACP1P24666 158 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 CD1CP29017 333 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 RPL9P32969 192 aaKnown RBP-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SPRR1AP35321 89 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 ALDH3B2P48448 385 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 LIMK1P53667 647 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 DEFB1P60022 68 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 RPS6P62753 249 aaKnown RBP-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 RPS27AP62979 156 aaKnown RBP-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 GCKRQ14397 625 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 NFE2L1Q14494 772 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TAL2Q16559 108 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 FAM106AQ4KMX7 169 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 FAM109BQ6ICB4 259 aaPredicted RBP-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TMEM81Q6P7N7 255 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 C6orf89Q6UWU4 347 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SOSTDC1Q6X4U4 206 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 BIVMQ86UB2 503 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 AMZ2Q86W34 360 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 MFSD6LQ8IWD5 586 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SUGP1Q8IWZ8 645 aaKnown RBP-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 TDHQ8IZJ6 230 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 GCSAMQ8N6F7 178 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SAMD12Q8N8I0 201 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PTGR2Q8N8N7 351 aaPredicted RBP-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 COLGALT1Q8NBJ5 622 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 C11orf72Q8NBR9 251 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SMC1BQ8NDV3 1235 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 OR4X1Q8NH49 305 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 GOT1L1Q8NHS2 421 aaPredicted RBP-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SPPL2BQ8TCT7 592 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 CRYGNQ8WXF5 182 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 PNPLA2Q96AD5 504 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 RAD51AP1Q96B01 352 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 FBXL8Q96CD0 374 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 GALNT14Q96FL9 552 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 AMDHD1Q96NU7 426 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 MAP7D2Q96T17 732 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 NUDT22Q9BRQ3 303 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 C1orf50Q9BV19 199 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SARGQ9BW04 601 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 S1PR5Q9H228 398 aa-2.87□□□□□ -2.87
RNU6-1340P-201ENST00000384438 SLC25A32Q9H2D1 315 aa-2.87□□□□□ -2.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms