RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ZSCAN12O43309 604 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 OR1F1O43749 312 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 VENTXO95231 258 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 PDHBP11177 359 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 LAMP1P11279 417 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 PGAM2P15259 253 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 CDH5P33151 784 aaPredicted RBP4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 CA8P35219 290 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 RGS4P49798 205 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 HNMTP50135 292 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 RND3P61587 244 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 OTUD4Q01804 1114 aaKnown RBP4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 CNTN2Q02246 1040 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 CSTF1Q05048 431 aaKnown RBP4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 RUNX3Q13761 415 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 SERTAD2Q14140 314 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 SELPLGQ14242 412 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 MESDQ14696 234 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 EIPR1Q53HC9 387 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 OLFML2AQ68BL7 652 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 ACSM5Q6NUN0 579 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 GCNT7Q6ZNI0 430 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 RGS9BPQ6ZS82 235 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 CYS1Q717R9 158 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 KIAA1328Q86T90 577 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 ACOT1Q86TX2 421 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 Q8N9G6 341 aaPredicted RBP4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 STXBP6Q8NFX7 210 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 TRMT10AQ8TBZ6 339 aaKnown RBP4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 TRUB1Q8WWH5 349 aaKnown RBP4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 TMEM80Q96HE8 168 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 OMDQ99983 421 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 GNG12Q9UBI6 72 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 CHRNA9Q9UGM1 479 aa4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 MRPS33Q9Y291 106 aaKnown RBP4.22□□□□□ -1.73
RNU6-40P-201ENST00000384254 C15orf38-AP3S2A0A0A6YYH1 394 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 MBLAC1A4D2B0 266 aaPredicted RBP4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 SLC17A2O00624 439 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 GPAA1O43292 621 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 SLC2A10O95528 541 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 UMPSP11172 480 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 GATA1P15976 413 aaPredicted RBP4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 PTBP1P26599 531 aaKnown RBP eCLIP4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 XCR1P46094 333 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 DHPSP49366 369 aaPredicted RBP4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 PLA2G16P53816 162 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 SPIBQ01892 262 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 LPAL2Q16609 132 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 TIMM50Q3ZCQ8 353 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 C2orf66Q6UXQ4 117 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 STAC2Q6ZMT1 411 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 SPEM1Q8N4L4 309 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 M1APQ8TC57 530 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 AENQ8WTP8 325 aaKnown RBP4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 OSTF1Q92882 214 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 RIT2Q99578 217 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 CRACR2AQ9BSW2 395 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 PNO1Q9NRX1 252 aaKnown RBP4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 CSAG2Q9Y5P2 127 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 ALG6Q9Y672 507 aa4.21□□□□□ -1.74
RNU6-40P-201ENST00000384254 A0A1W2PNV4 684 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 SAGE2PA6NJ88 616 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 E9PLD3 99 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 N4BP1O75113 896 aaKnown RBP4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 MTX2O75431 263 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 CRLF1O75462 422 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 LRATO95237 230 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 IGF1P05019 195 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 CD55P08174 381 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 TBXA2RP21731 343 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 CALB2P22676 271 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 PAX7P23759 505 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 CSRP3P50461 194 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 GBX2P52951 348 aaPredicted RBP4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 RPL8P62917 257 aaKnown RBP4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 CD47Q08722 323 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 TGIF1Q15583 401 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 QRICH1Q2TAL8 776 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 C15orf32Q32M92 178 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 RNLSQ5VYX0 342 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 TTC23Q5W5X9 447 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 CASC1Q6TDU7 716 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 CCBE1Q6UXH8 406 aaPredicted RBP4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 VASH2Q86V25 355 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 NAXDQ8IW45 347 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 SLC39A11Q8N1S5 342 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 MTURNQ8N3F0 131 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 CADM2Q8N3J6 435 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 CLDN19Q8N6F1 224 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 CSNK1A1LQ8N752 337 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 SYT14Q8NB59 555 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 C1orf147Q96MC9 270 aaPredicted RBP4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 TM2D1Q9BX74 207 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 NT5C3AQ9H0P0 336 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 NXF5Q9H1B4 397 aaKnown RBP4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 ELOVL3Q9HB03 270 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 RPH3ALQ9UNE2 315 aa4.2□□□□□ -1.74
RNU6-40P-201ENST00000384254 OARD1Q9Y530 152 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms