RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 SYT16Q17RD7 645 aa17.83■□□□□ 0.44
GMDS-201ENST00000380805 SYT14P1Q58G82 188 aa17.83■□□□□ 0.44
GMDS-201ENST00000380805 NKAIN2Q5VXU1 208 aa17.83■□□□□ 0.44
GMDS-201ENST00000380805 C19orf48Q6RUI8 117 aa17.83■□□□□ 0.44
GMDS-201ENST00000380805 SLC35F3Q8IY50 421 aa17.83■□□□□ 0.44
GMDS-201ENST00000380805 RACGAP1Q9H0H5 632 aa17.83■□□□□ 0.44
GMDS-201ENST00000380805 EGLN3Q9H6Z9 239 aa17.83■□□□□ 0.44
GMDS-201ENST00000380805 KRCC1Q9NPI7 259 aaPredicted RBP17.83■□□□□ 0.44
GMDS-201ENST00000380805 DNAJC27Q9NZQ0 273 aa17.83■□□□□ 0.44
GMDS-201ENST00000380805 ZNF223Q9UK11 482 aaPredicted RBP17.83■□□□□ 0.44
GMDS-201ENST00000380805 SLC7A7Q9UM01 511 aa17.83■□□□□ 0.44
GMDS-201ENST00000380805 USP34Q70CQ2 3546 aa17.83■□□□□ 0.44
GMDS-201ENST00000380805 DUX1O43812 170 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 PRG2P13727 222 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 SSTR4P31391 388 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 ENTPD1P49961 510 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 BTG2P78543 158 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 HSD11B2P80365 405 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 CFHR1Q03591 330 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 ZNF141Q15928 474 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 FLYWCH1Q4VC44 716 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 ZNF613Q6PF04 617 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 TSSK4Q6SA08 328 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 ZNF620Q6ZNG0 422 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 PRSS42Q7Z5A4 293 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 ZAR1Q86SH2 424 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 PLXDC1Q8IUK5 500 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 CROCCP3Q8IVE0 287 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 NRMQ8IXM6 262 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 D2HGDHQ8N465 521 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 TMEM163Q8TC26 289 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 DYNC2LI1Q8TCX1 351 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 TMEM255BQ8WV15 326 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 OSTF1Q92882 214 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 PRRG3Q9BZD7 231 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 LANCL2Q9NS86 450 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 CNIH4Q9P003 139 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 LSM2Q9Y333 95 aaKnown RBP17.82■□□□□ 0.44
GMDS-201ENST00000380805 MMACHCQ9Y4U1 282 aa17.82■□□□□ 0.44
GMDS-201ENST00000380805 A0A1B0GVT2 93 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 HRKO00198 91 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 UGT2B10P36537 528 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 MLLT10P55197 1068 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 OR1D5P58170 312 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 SRSF5Q13243 272 aaKnown RBP17.81■□□□□ 0.44
GMDS-201ENST00000380805 SHBQ15464 509 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 OR1Q1Q15612 314 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 ZNF829Q3KNS6 432 aaPredicted RBP17.81■□□□□ 0.44
GMDS-201ENST00000380805 NPSR1Q6W5P4 371 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 KMT5CQ86Y97 462 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 ZNF615Q8N8J6 731 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 LGALS12Q96DT0 336 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 VMP1Q96GC9 406 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 TMEM80Q96HE8 168 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 SLC41A2Q96JW4 573 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 OR1F2PQ96R84 312 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 DSN1Q9H410 356 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 CUTCQ9NTM9 273 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 MED17Q9NVC6 651 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 NPIPA5A0A0B4J1W7 369 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 NPIPA7E9PJI5 369 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 TLX2O43763 284 aaPredicted RBP17.81■□□□□ 0.44
GMDS-201ENST00000380805 CDC123O75794 336 aaPredicted RBP17.81■□□□□ 0.44
GMDS-201ENST00000380805 NTN1O95631 604 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 IGKV1D-16P01601 117 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 CLPSP04118 112 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 NPIPA8P0DM63 369 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 CSTF2P33240 577 aaKnown RBP eCLIP17.81■□□□□ 0.446e-7■■■□□ 18.8
GMDS-201ENST00000380805 MAML2Q8IZL2 1156 aaPredicted RBP17.81■□□□□ 0.44
GMDS-201ENST00000380805 DTWD2Q8NBA8 298 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 NDNFQ8TB73 568 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 OIT3Q8WWZ8 545 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 AHCYL2Q96HN2 611 aaKnown RBP17.81■□□□□ 0.44
GMDS-201ENST00000380805 ZNF582Q96NG8 517 aaPredicted RBP17.81■□□□□ 0.44
GMDS-201ENST00000380805 DACH2Q96NX9 599 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 SLC38A2Q96QD8 506 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 ZNF559Q9BR84 538 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 TSSK6Q9BXA6 273 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 GMEB2Q9UKD1 530 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 DTX4Q9Y2E6 619 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 CDH10Q9Y6N8 788 aa17.81■□□□□ 0.44
GMDS-201ENST00000380805 KDM4EB2RXH2 506 aaPredicted RBP17.8■□□□□ 0.44
GMDS-201ENST00000380805 HYAL3O43820 417 aaPredicted RBP17.8■□□□□ 0.44
GMDS-201ENST00000380805 CT45A8P0DMV1 189 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 CT45A9P0DMV2 189 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 MAOAP21397 527 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 CSF2RBP32927 897 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 RGS6P49758 472 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 PSMD4P55036 377 aaKnown RBP17.8■□□□□ 0.44
GMDS-201ENST00000380805 VBP1P61758 197 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 ERV3-1Q14264 604 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 ZNF267Q14586 743 aaPredicted RBP17.8■□□□□ 0.44
GMDS-201ENST00000380805 CT45A2Q5DJT8 189 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 ARMCX4Q5H9R4 360 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 WDR74Q6RFH5 385 aaPredicted RBP17.8■□□□□ 0.44
GMDS-201ENST00000380805 WDR88Q6ZMY6 472 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 C1orf210Q8IVY1 113 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 C7orf57Q8NEG2 295 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 OR7G1Q8NGA0 311 aa17.8■□□□□ 0.44
GMDS-201ENST00000380805 WDR36Q8NI36 951 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms