RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PANX1Q96RD7 426 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 STACQ99469 402 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 INPP5KQ9BT40 448 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 CCDC28BQ9BUN5 200 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 BTBD2Q9BX70 525 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 TBL1XR1Q9BZK7 514 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 NPHS2Q9NP85 383 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 MED4Q9NPJ6 270 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 SDR39U1Q9NRG7 319 aaPredicted RBP8.42□□□□□ -1.06
HMGN1-202ENST00000380747 SDHAF3Q9NRP4 125 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 GPATCH2Q9NW75 528 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 QPCTLQ9NXS2 382 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 ZIM2Q9NZV7 527 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 PPP4R1LQ9P1A2 415 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 TNFRSF10DQ9UBN6 386 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 BTNL2Q9UIR0 455 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 WIF1Q9Y5W5 379 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 CROCCQ5TZA2 2017 aa8.42□□□□□ -1.06
HMGN1-202ENST00000380747 C15orf38-AP3S2A0A0A6YYH1 394 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 A0A1B0GVC2 190 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 CCDC154A6NI56 674 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 C17orf51A8MQB3 221 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 AQP7O14520 342 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 BCKDKO14874 412 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 ATP8B1O43520 1251 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 FADS1O60427 444 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 ZG16O60844 167 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 KCNK2O95069 426 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 IL6P05231 212 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 HPNP05981 417 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 GSNP06396 782 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 UQCRC2P22695 453 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 TCEA1P23193 301 aaKnown RBP8.41□□□□□ -1.06
HMGN1-202ENST00000380747 POLR2JP52435 117 aaKnown RBP8.41□□□□□ -1.06
HMGN1-202ENST00000380747 GRAMD1BQ3KR37 738 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 TIGD2Q4W5G0 525 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 EIPR1Q53HC9 387 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 EXOSC6Q5RKV6 272 aaKnown RBP8.41□□□□□ -1.06
HMGN1-202ENST00000380747 ZNF621Q6ZSS3 439 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 ZAR1Q86SH2 424 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 WDSUB1Q8N9V3 476 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 GATSQ8NAP1 163 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 OR9I1Q8NGQ6 314 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 OR14L1PQ8NHC6 308 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 RFWD2Q8NHY2 731 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 FAM110BQ8TC76 370 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 SARAFQ96BY9 339 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 NTNG2Q96CW9 530 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 CCDC115Q96NT0 180 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 SLC35A5Q9BS91 424 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 G6PC3Q9BUM1 346 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 ACKR4Q9NPB9 350 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 DUSP22Q9NRW4 184 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 PNPLA3Q9NST1 481 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 FBXO34Q9NWN3 711 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 GIN1Q9NXP7 522 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 SPRR3Q9UBC9 169 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 DKKL1Q9UK85 242 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 FBXL2Q9UKC9 423 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 ACAD8Q9UKU7 415 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 ABCG2Q9UNQ0 655 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 PCDHGB3Q9Y5G1 929 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 KCNE3Q9Y6H6 103 aa8.41□□□□□ -1.06
HMGN1-202ENST00000380747 NPIPA5A0A0B4J1W7 369 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 A0A0G2JND7 137 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 FAM234BA2RU67 622 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 OR14I1A6ND48 311 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 DUXAA6NLW8 204 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 NPIPA7E9PJI5 369 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 SCDO00767 359 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 RFXANKO14593 260 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 GMFGO60234 142 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 SUSD5O60279 629 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 CBR3O75828 277 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 ANP32DO95626 131 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 OXSR1O95747 527 aaPredicted RBP8.4□□□□□ -1.06
HMGN1-202ENST00000380747 ANGPTL1O95841 491 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 VIMP08670 466 aaKnown RBP8.4□□□□□ -1.06
HMGN1-202ENST00000380747 NPIPA8P0DM63 369 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 OR12D1P0DN82 309 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 HPGDP15428 266 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 NCF2P19878 526 aaPredicted RBP8.4□□□□□ -1.06
HMGN1-202ENST00000380747 ENDOUP21128 410 aaKnown RBP8.4□□□□□ -1.06
HMGN1-202ENST00000380747 GCKP35557 465 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 CDKN2CP42773 168 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 GAS1P54826 345 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 GUCY1A3Q02108 690 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 LRRC74AQ0VAA2 488 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 SF3A3Q12874 501 aaKnown RBP eCLIP8.4□□□□□ -1.066e-7■□□□□ 11.3
HMGN1-202ENST00000380747 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.4□□□□□ -1.06
HMGN1-202ENST00000380747 GXYLT1Q4G148 440 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 DCST2Q5T1A1 773 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 WLSQ5T9L3 541 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 SAXO2Q658L1 398 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 ZNF585AQ6P3V2 769 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 MTFR2Q6P444 385 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 TNFAIP8L2Q6P589 184 aaPredicted RBP8.4□□□□□ -1.06
HMGN1-202ENST00000380747 NCCRP1Q6ZVX7 275 aaPredicted RBP8.4□□□□□ -1.06
HMGN1-202ENST00000380747 MCEMP1Q8IX19 187 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 EID3Q8N140 333 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms