RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 PDPK1O15530 556 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 PYGBP11216 843 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 HPGDP15428 266 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 ME2P23368 584 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 GCAP28676 217 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 ECHS1P30084 290 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 SLC29A2Q14542 456 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 TMEM44Q2T9K0 475 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 PDSS1Q5T2R2 415 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 HBMQ6B0K9 141 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 NOXRED1Q6NXP6 359 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 FIGNL1Q6PIW4 674 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 OR2V1Q8NHB1 315 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 AKAP1Q92667 903 aaKnown RBP eCLIP20.67■□□□□ 0.9
U2AF1-202ENST00000380276 NPAS1Q99742 590 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 LAMP3Q9UQV4 416 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 A0A087WZY1 265 aa20.66■□□□□ 0.9
U2AF1-202ENST00000380276 OXSR1O95747 527 aaPredicted RBP20.66■□□□□ 0.9
U2AF1-202ENST00000380276 TUBBP07437 444 aa20.66■□□□□ 0.9
U2AF1-202ENST00000380276 MYL2P10916 166 aa20.66■□□□□ 0.9
U2AF1-202ENST00000380276 VEZF1Q14119 521 aa20.66■□□□□ 0.9
U2AF1-202ENST00000380276 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.66■□□□□ 0.9
U2AF1-202ENST00000380276 IKBIPQ70UQ0 350 aa20.66■□□□□ 0.9
U2AF1-202ENST00000380276 ZNF611Q8N823 705 aa20.66■□□□□ 0.9
U2AF1-202ENST00000380276 NUP43Q8NFH3 380 aa20.66■□□□□ 0.9
U2AF1-202ENST00000380276 ZFP28Q8NHY6 868 aa20.66■□□□□ 0.9
U2AF1-202ENST00000380276 FAM76AQ8TAV0 307 aa20.66■□□□□ 0.9
U2AF1-202ENST00000380276 EGLN2Q96KS0 407 aa20.66■□□□□ 0.9
U2AF1-202ENST00000380276 C16orf45Q96MC5 204 aaPredicted RBP20.66■□□□□ 0.9
U2AF1-202ENST00000380276 REPIN1Q9BWE0 567 aaKnown RBP20.66■□□□□ 0.9
U2AF1-202ENST00000380276 A0A1W2PRB8 838 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 SEC22BO75396 215 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 RSL1D1O76021 490 aaKnown RBP20.65■□□□□ 0.9
U2AF1-202ENST00000380276 RPS4XP62701 263 aaKnown RBP20.65■□□□□ 0.9
U2AF1-202ENST00000380276 SLC18A2Q05940 514 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 TNK1Q13470 666 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 CFAP157Q5JU67 520 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 GTPBP8Q8N3Z3 284 aaPredicted RBP20.65■□□□□ 0.9
U2AF1-202ENST00000380276 MAPK1IP1LQ8NDC0 245 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 OR4C3Q8NH37 302 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.65■□□□□ 0.9
U2AF1-202ENST00000380276 CIDECQ96AQ7 238 aaPredicted RBP20.65■□□□□ 0.9
U2AF1-202ENST00000380276 ZBTB8AQ96BR9 441 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 CCDC126Q96EE4 140 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 OTUB1Q96FW1 271 aaPredicted RBP20.65■□□□□ 0.9
U2AF1-202ENST00000380276 CHMP6Q96FZ7 201 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 REXO5Q96IC2 774 aaKnown RBP20.65■□□□□ 0.9
U2AF1-202ENST00000380276 IQCGQ9H095 443 aaKnown RBP20.65■□□□□ 0.9
U2AF1-202ENST00000380276 HHATLQ9HCP6 504 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 GLRX2Q9NS18 164 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 ZNF701Q9NV72 531 aaPredicted RBP20.65■□□□□ 0.9
U2AF1-202ENST00000380276 MED17Q9NVC6 651 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 TBK1Q9UHD2 729 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 GPR52Q9Y2T5 361 aa20.65■□□□□ 0.9
U2AF1-202ENST00000380276 WBP11Q9Y2W2 641 aaKnown RBP20.65■□□□□ 0.9
U2AF1-202ENST00000380276 ALG1L2C9J202 215 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 CLOCKO15516 846 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 AKAP10O43572 662 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 NKX2-2O95096 273 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 ABHD2P08910 425 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 IL11P20809 199 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 AGTR1P30556 359 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 SFTPDP35247 375 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 RAC1P63000 192 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 PLPPR5Q32ZL2 321 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 GLE1Q53GS7 698 aaKnown RBP20.64■□□□□ 0.89
U2AF1-202ENST00000380276 GTF2IRD2BQ6EKJ0 949 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 ESPNLQ6ZVH7 1005 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 GTF2IRD2Q86UP8 949 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 CDRT4Q8N9R6 151 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 CEP70Q8NHQ1 597 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 ROBO4Q8WZ75 1007 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 JADE3Q92613 823 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 ADGRG7Q96K78 797 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 ADAM21Q9UKJ8 722 aa20.64■□□□□ 0.89
U2AF1-202ENST00000380276 A0A0J9YW62 118 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 SCDO00767 359 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 ACP2P11117 423 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 PAX1P15863 534 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 MANFP55145 182 aaKnown RBP20.63■□□□□ 0.89
U2AF1-202ENST00000380276 CAPRIN1Q14444 709 aaKnown RBP20.63■□□□□ 0.89
U2AF1-202ENST00000380276 TSC22D1Q15714 1073 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 CLEC12BQ2HXU8 276 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 TMEM201Q5SNT2 666 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 CPTPQ5TA50 214 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 MFSD12Q6NUT3 480 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 CXXC5Q7LFL8 322 aaKnown RBP20.63■□□□□ 0.89
U2AF1-202ENST00000380276 TRIM46Q7Z4K8 759 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 ZNF619Q8N2I2 560 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 CCDC63Q8NA47 563 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 MNS1Q8NEH6 495 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 STEAP2Q8NFT2 490 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 RAB3IL1Q8TBN0 382 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 ACMSDQ8TDX5 336 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 IGFBPL1Q8WX77 278 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 OSTF1Q92882 214 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 GTPBP3Q969Y2 492 aaKnown RBP20.63■□□□□ 0.89
U2AF1-202ENST00000380276 S100PBPQ96BU1 408 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 PPCDCQ96CD2 204 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 KLHL15Q96M94 604 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms