RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 TAF1P21675 1872 aa7.99□□□□□ -1.13
NHLRC3-201ENST00000379599 STRCQ7RTU9 1775 aa7.99□□□□□ -1.13
NHLRC3-201ENST00000379599 ARID2Q68CP9 1835 aa7.99□□□□□ -1.13
NHLRC3-201ENST00000379599 A0A1W2PPH5 198 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 UBE2QL1A1L167 161 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 A8MVJ9 347 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 F5H5P2 479 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 CLIC1O00299 241 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 GABRPO00591 440 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 EREGO14944 169 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 HSPA12AO43301 675 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 PRKYO43930 277 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 HLA-DPB1P04440 258 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 EDN1P05305 212 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 PFKMP08237 780 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 OR8G3PP0DMU2 310 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 C1GALT1C1LP0DN25 315 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 BCKDHAP12694 445 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 MGMTP16455 207 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 MPGP29372 298 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ZNF140P52738 457 aaPredicted RBP7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 DLX5P56178 289 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 E2F1Q01094 437 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 TMEM132DQ14C87 1099 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 HEPACAMQ14CZ8 416 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 PAFAH1B3Q15102 231 aaKnown RBP7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 DMRTA1Q5VZB9 504 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 DCAF15Q66K64 600 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 GDPD4Q6W3E5 623 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ZNF546Q86UE3 836 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 CILP2Q8IUL8 1156 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 NPAS3Q8IXF0 933 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 SLC44A3Q8N4M1 653 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 OR52I1Q8NGK6 324 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ARL11Q969Q4 196 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 RELTQ969Z4 430 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 TSSK3Q96PN8 268 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 PKP4Q99569 1192 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 UQCC1Q9NVA1 299 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 TMEM248Q9NWD8 314 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 IL17BQ9UHF5 180 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 OPN4Q9UHM6 478 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ASB1Q9Y576 335 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 MRPL42Q9Y6G3 142 aaKnown RBP7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 A0A1B0GUH1 482 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 TRDV1A0A1B0GX56 115 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 MOXD2PA6NHM9 499 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ZAR1LA6NP61 321 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 LRRN3E7EW58 273 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 FAM72CH0Y354 149 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 J3KTA2 159 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 KERAO60938 352 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 HNF1AP20823 631 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 IDSP22304 550 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 RFX3P48380 749 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 PITX1P78337 314 aaPredicted RBP7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 TCP10Q12799 353 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 GAB1Q13480 694 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ARHGEF7Q14155 803 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ATXN7L3Q14CW9 347 aaPredicted RBP7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 SLC14A2Q15849 920 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 FAM189A2Q15884 450 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 FAM72AQ5TYM5 149 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 FAM72DQ6L9T8 149 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ACOT1Q86TX2 421 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 FAM72BQ86X60 149 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 LAS2Q8IYD9 372 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 PNPLA2Q96AD5 504 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 CCDC74BQ96LY2 380 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 CDCA3Q99618 268 aaPredicted RBP7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 SEC11CQ9BY50 192 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 LRRN3Q9H3W5 708 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 SPACA1Q9HBV2 294 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 TREX1Q9NSU2 369 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 SF3B6Q9Y3B4 125 aaKnown RBP7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 BRCA1P38398 1863 aaKnown RBP7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 NUP205Q92621 2012 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 TRBV5-3A0A0A0MS03 114 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ANKRD61A6NGH8 418 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 FAM227AF5H4B4 570 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 DVL2O14641 736 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 FMO6PO60774 539 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 OR2A4O95047 310 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 KCNK5O95279 499 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ARIH2O95376 493 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 SNRNP70P08621 437 aaKnown RBP7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 TXNP10599 105 aaKnown RBP7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ETFAP13804 333 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 RAB5AP20339 215 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 FGF9P31371 208 aaPredicted RBP7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ART1P52961 327 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 SLC35D3Q5M8T2 416 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 HACD4Q5VWC8 232 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 PAQR3Q6TCH7 311 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ZNF574Q6ZN55 896 aaPredicted RBP7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 ESPNLQ6ZVH7 1005 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 WDR53Q7Z5U6 358 aaPredicted RBP7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 LRRTM4Q86VH4 590 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 NPWQ8N729 165 aa7.98□□□□□ -1.13
NHLRC3-201ENST00000379599 FAM71CQ8NEG0 241 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms