RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 ARSGQ96EG1 525 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 MAP3K3Q99759 626 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 TSSK6Q9BXA6 273 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 DCSTAMPQ9H295 470 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 PRDM9Q9NQV7 894 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 KCNE5Q9UJ90 142 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 A0A0A6YYC8 382 aaPredicted RBP13.82□□□□□ -0.2
PRNP-201ENST00000379440 I3L1I5 382 aaPredicted RBP13.82□□□□□ -0.2
PRNP-201ENST00000379440 TAF4O00268 1085 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 CHST10O43529 356 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 PLOD3O60568 738 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 PRG2P13727 222 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 CBX5P45973 191 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 TAGLNQ01995 201 aaKnown RBP13.82□□□□□ -0.2
PRNP-201ENST00000379440 ZC3H14Q6PJT7 736 aaKnown RBP13.82□□□□□ -0.2
PRNP-201ENST00000379440 IDO2Q6ZQW0 420 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 RRM2BQ7LG56 351 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 CCDC28AQ8IWP9 274 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 Q8N9G6 341 aaPredicted RBP13.82□□□□□ -0.2
PRNP-201ENST00000379440 GNPDA2Q8TDQ7 276 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 GPR151Q8TDV0 419 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 LMX1AQ8TE12 382 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 TMEM255BQ8WV15 326 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 MGLLQ99685 303 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 FOXQ1Q9C009 403 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 SLIRPQ9GZT3 109 aaKnown RBP13.82□□□□□ -0.2
PRNP-201ENST00000379440 HOXD1Q9GZZ0 328 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 ANKHQ9HCJ1 492 aa13.82□□□□□ -0.2
PRNP-201ENST00000379440 GXYLT2A0PJZ3 443 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 FAM172BPA6NC97 362 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 AGAP5A6NIR3 686 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 PIP5K1CO60331 668 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 ZNF217O75362 1048 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 CSF2P04141 144 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 GKN3PP0CG01 181 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 DBTP11182 482 aaKnown RBP13.81□□□□□ -0.2
PRNP-201ENST00000379440 PIPP12273 146 aaPredicted RBP13.81□□□□□ -0.2
PRNP-201ENST00000379440 OMPP47874 163 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 RAB38P57729 211 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 EEF1A1P68104 462 aaKnown RBP13.81□□□□□ -0.2
PRNP-201ENST00000379440 LARS2Q15031 903 aaKnown RBP13.81□□□□□ -0.2
PRNP-201ENST00000379440 TSTQ16762 297 aaKnown RBP13.81□□□□□ -0.2
PRNP-201ENST00000379440 CLEC12AQ5QGZ9 265 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 ARHGEF39Q8N4T4 335 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 COX18Q8N8Q8 333 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 C9orf43Q8TAL5 461 aaPredicted RBP13.81□□□□□ -0.2
PRNP-201ENST00000379440 SLC41A3Q96GZ6 507 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 LRR1Q96L50 414 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 POLDIP3Q9BY77 421 aaKnown RBP13.81□□□□□ -0.2
PRNP-201ENST00000379440 ZNF350Q9GZX5 532 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 SAP130Q9H0E3 1048 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 MIR1-1HGQ9H1L0 117 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 TRIM45Q9H8W5 580 aaPredicted RBP13.81□□□□□ -0.2
PRNP-201ENST00000379440 HCN3Q9P1Z3 774 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 OSGIN1Q9UJX0 560 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 GPR52Q9Y2T5 361 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 A0A087WV62 115 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 OR2W5A6NFC9 320 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 H3BUI4 141 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 CDC123O75794 336 aaPredicted RBP13.81□□□□□ -0.2
PRNP-201ENST00000379440 GSTM3P21266 225 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 CD38P28907 300 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 GABRA3P34903 492 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 RFX3P48380 749 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 PPM1FP49593 454 aaPredicted RBP13.81□□□□□ -0.2
PRNP-201ENST00000379440 DUSP8Q13202 625 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 ERV3-1Q14264 604 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 SNAPC1Q16533 368 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 IGSF11Q5DX21 431 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 EXOSC6Q5RKV6 272 aaKnown RBP13.81□□□□□ -0.2
PRNP-201ENST00000379440 PAQR6Q6TCH4 344 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 ZNF367Q7RTV3 350 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 IGFN1Q86VF2 1251 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 GALNT12Q8IXK2 581 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 SLC34A3Q8N130 599 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 TMEM80Q96HE8 168 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 CHCHD6Q9BRQ6 235 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 SP140LQ9H930 580 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 SLC7A7Q9UM01 511 aa13.81□□□□□ -0.2
PRNP-201ENST00000379440 RPL36Q9Y3U8 105 aaKnown RBP13.81□□□□□ -0.2
PRNP-201ENST00000379440 LAMA1P25391 3075 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 PCP4L1A6NKN8 68 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 RPLP0P05388 317 aaKnown RBP13.8□□□□□ -0.2
PRNP-201ENST00000379440 GPR4P46093 362 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 ZNF136P52737 540 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 EFNB1P98172 346 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 MAT1AQ00266 395 aaKnown RBP13.8□□□□□ -0.2
PRNP-201ENST00000379440 TSPAN31Q12999 210 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 OCLNQ16625 522 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 SYT14P1Q58G82 188 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.8□□□□□ -0.2
PRNP-201ENST00000379440 NRMQ8IXM6 262 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 ZNF619Q8N2I2 560 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 FAM26EQ8N5C1 309 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 CDRT4Q8N9R6 151 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 CACYBPQ9HB71 228 aaKnown RBP13.8□□□□□ -0.2
PRNP-201ENST00000379440 A0A1W2PR77 199 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 METTL12A8MUP2 240 aa13.8□□□□□ -0.2
PRNP-201ENST00000379440 CLDN25C9JDP6 229 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms