RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 RABIFP47224 123 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 EMX1Q04741 257 aaPredicted RBP10.1□□□□□ -0.79
NEDD9-201ENST00000379433 TGM3Q08188 693 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 GFOD2Q3B7J2 385 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 DCST1Q5T197 706 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 SAXO2Q658L1 398 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 PTCRAQ6ISU1 281 aaPredicted RBP10.1□□□□□ -0.79
NEDD9-201ENST00000379433 TCTN3Q6NUS6 607 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 PAPD4Q6PIY7 484 aaKnown RBP10.1□□□□□ -0.79
NEDD9-201ENST00000379433 IQCHQ86VS3 1027 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 ZFYVE21Q9BQ24 234 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 GSDMCQ9BYG8 508 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 KCNN2Q9H2S1 579 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 FBXO34Q9NWN3 711 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 CNIH4Q9P003 139 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 SCML1Q9UN30 329 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 PLCL2Q9UPR0 1127 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 GPR55Q9Y2T6 319 aaPredicted RBP10.1□□□□□ -0.79
NEDD9-201ENST00000379433 SOX1O00570 391 aaPredicted RBP10.1□□□□□ -0.79
NEDD9-201ENST00000379433 SLC25A17O43808 307 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 OR10H2O60403 315 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 NOS1APO75052 506 aaPredicted RBP10.1□□□□□ -0.79
NEDD9-201ENST00000379433 MFN2O95140 757 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 ALDH3B2P48448 385 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 DHPSP49366 369 aaPredicted RBP10.1□□□□□ -0.79
NEDD9-201ENST00000379433 CRISP3P54108 245 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 GFERP55789 205 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 PRR5P85299 388 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 IRAK1BP1Q5VVH5 260 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 KIAA0895LQ68EN5 471 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 FCRL6Q6DN72 434 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 CDC73Q6P1J9 531 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 SLC48A1Q6P1K1 146 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 PTCHD4Q6ZW05 846 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 GPR155Q7Z3F1 870 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 PAQR7Q86WK9 346 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 ENTHD1Q8IYW4 607 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 MFSD9Q8NBP5 474 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 GPR151Q8TDV0 419 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 ASB12Q8WXK4 309 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 OR2A5Q96R48 311 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 PHF7Q9BWX1 381 aaPredicted RBP10.1□□□□□ -0.79
NEDD9-201ENST00000379433 TINAGQ9UJW2 476 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 RNF24Q9Y225 148 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 RNF6Q9Y252 685 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 ENPP4Q9Y6X5 453 aa10.1□□□□□ -0.79
NEDD9-201ENST00000379433 CENPVL1A0A0U1RR11 272 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 SPTY2D1-AS1A0A0U1RR47 76 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 J3QRK9 145 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 PRICKLE3O43900 615 aaPredicted RBP10.09□□□□□ -0.79
NEDD9-201ENST00000379433 ABCB7O75027 752 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 HPRP00739 348 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 STSP08842 583 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 CNR2P34972 360 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 PDX1P52945 283 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 TAS2R41P59536 307 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 KIAA1024LP59773 190 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 ABATP80404 500 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 PCDH1Q08174 1060 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 PTGES3Q15185 160 aaKnown RBP10.09□□□□□ -0.79
NEDD9-201ENST00000379433 MICAQ29983 383 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 IQCCQ4KMZ1 466 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 SOWAHCQ53LP3 525 aaPredicted RBP10.09□□□□□ -0.79
NEDD9-201ENST00000379433 MANEAQ5SRI9 462 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 DEGS2Q6QHC5 323 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 ZNF605Q86T29 641 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 CCDC103Q8IW40 242 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 STX19Q8N4C7 294 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 SLC7A13Q8TCU3 470 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 OR7D2Q96RA2 312 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 COPS4Q9BT78 406 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 CNPPD1Q9BV87 410 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 LRRC61Q9BV99 259 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 FUNDC2Q9BWH2 189 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 TVP23BQ9NYZ1 205 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 IFT52Q9Y366 437 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 PCDHGA6Q9Y5G7 932 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 DBX1A6NMT0 343 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 C2orf74A8MZ97 194 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 FGF17O60258 216 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 PRKCAP17252 672 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 NDUFS1P28331 727 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 TLX1P31314 330 aaPredicted RBP10.09□□□□□ -0.79
NEDD9-201ENST00000379433 CASP6P55212 293 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 RPS15AP62244 130 aaKnown RBP10.09□□□□□ -0.79
NEDD9-201ENST00000379433 EPS8Q12929 822 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 TMEM35AQ53FP2 167 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 ATAD3BQ5T9A4 648 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 SNX29P2Q8IUI4 249 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 SETD9Q8NE22 299 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 OR4K14Q8NGD5 310 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 DTD1Q8TEA8 209 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 CA5BP1Q8WTZ4 195 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 ELP4Q96EB1 424 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 PINK1Q9BXM7 581 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 TMEM38AQ9H6F2 299 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 TIMMDC1Q9NPL8 285 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 MS4A12Q9NXJ0 267 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 NKIRAS2Q9NYR9 191 aa10.09□□□□□ -0.79
NEDD9-201ENST00000379433 WSB2Q9NYS7 404 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms