RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 ZFP36L1Q07352 338 aaKnown RBP16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 ILKQ13418 452 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 ZNF141Q15928 474 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 PPP1R3BQ86XI6 285 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 CNOT9Q92600 299 aaKnown RBP16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 ARSGQ96EG1 525 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 SLC46A1Q96NT5 459 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 G6PC3Q9BUM1 346 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 POLR2J3Q9H1A7 115 aaKnown RBP16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 BLOC1S6Q9UL45 172 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 PCDHGA5Q9Y5G8 931 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 DYRK3O43781 588 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 LDOC1O95751 146 aaPredicted RBP16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 ZGLP1P0C6A0 271 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 KRT20P35900 424 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 IDH2P48735 452 aaKnown RBP16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 CXCR4P61073 352 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 CD300LDQ6UXZ3 194 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 RANBP3LQ86VV4 465 aaPredicted RBP16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 MEX3DQ86XN8 651 aaKnown RBP16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 ZNF614Q8N883 585 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 CTRCQ99895 268 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 ZNF226Q9NYT6 803 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 EFCAB7A8K855 629 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 M0R129 80 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 ADAM11O75078 769 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 GABRB1P18505 474 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 POU1F1P28069 291 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 PPICP45877 212 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 BROXQ5VW32 411 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 RBM44Q6ZP01 1051 aaKnown RBP16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 KCTD8Q6ZWB6 473 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 PRICKLE2Q7Z3G6 844 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 CCDC103Q8IW40 242 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 AMER2Q8N7J2 671 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 BMPERQ8N8U9 685 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 C7orf57Q8NEG2 295 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 OR4C3Q8NH37 302 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 OR14A16Q8NHC5 309 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 RHOXF1Q8NHV9 184 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 ADIPOR1Q96A54 375 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 RHNO1Q9BSD3 238 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 NXF5Q9H1B4 397 aaKnown RBP16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 ARMC7Q9H6L4 198 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 NDUFA13Q9P0J0 144 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 SLC7A7Q9UM01 511 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 PCDHGB2Q9Y5G2 931 aa16.03■□□□□ 0.16
THUMPD2-201ENST00000378727 COL27A1Q8IZC6 1860 aaPredicted RBP16.02■□□□□ 0.16
THUMPD2-201ENST00000378727 PTGES3LE9PB15 166 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 ABCB7O75027 752 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 LYPD3O95274 346 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 ONECUT2O95948 504 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 FGF5P12034 268 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 ACP1P24666 158 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 IFNA8P32881 189 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 CSTF2P33240 577 aaKnown RBP eCLIP16.02■□□□□ 0.152e-6■■■■□ 23.4
THUMPD2-201ENST00000378727 ATP12AP54707 1039 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 DCDP81605 110 aaKnown RBP16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 OR1Q1Q15612 314 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 DECR1Q16698 335 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 FAAH2Q6GMR7 532 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 ZNF730Q6ZMV8 503 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 GRAMD2AQ8IUY3 354 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 TMEM255BQ8WV15 326 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 ACOT11Q8WXI4 607 aaPredicted RBP16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 DAZLQ92904 295 aaKnown RBP16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 PRSS27Q9BQR3 290 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 MESP1Q9BRJ9 268 aa16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 DNAJB12Q9NXW2 375 aaKnown RBP16.02■□□□□ 0.15
THUMPD2-201ENST00000378727 RALGAPA1Q6GYQ0 2036 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 TRAPPC13A5PLN9 417 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 FMO6PO60774 539 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 OMPP47874 163 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 OCA2Q04671 838 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 COX10Q12887 443 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 TRA2AQ13595 282 aaKnown RBP eCLIP16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 FGFBP1Q14512 234 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 LCN10Q6JVE6 187 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 C9orf40Q8IXQ3 194 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 SPARTQ8N0X7 666 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 RHBDD1Q8TEB9 315 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 EFHD2Q96C19 240 aaPredicted RBP16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 POLR2J2Q9GZM3 115 aaKnown RBP16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 DUSP21Q9H596 190 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 POLR1BQ9H9Y6 1135 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 TESQ9UGI8 421 aaKnown RBP16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 CFL2Q9Y281 166 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 POLR1CO15160 346 aaPredicted RBP16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 CNOT3O75175 753 aaKnown RBP16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 GP1BAP07359 652 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 ACAA2P42765 397 aaKnown RBP16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 SLC35A2P78381 396 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 ALDH6A1Q02252 535 aaKnown RBP16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 PMS2P3Q13401 168 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 IL11RAQ14626 422 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 XAF1Q6GPH4 301 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 BORAQ6PGQ7 559 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 WDR88Q6ZMY6 472 aa16.01■□□□□ 0.15
THUMPD2-201ENST00000378727 OVCH1Q7RTY7 1134 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms