RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 IKZF5Q9H5V7 419 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 POMPQ9Y244 141 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 FAM215AQ9Y5M1 114 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 HCFC1P51610 2035 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 EML6Q6ZMW3 1958 aa12.58□□□□□ -0.4
PRPF18-202ENST00000378572 A0A0G2JNJ9 132 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 SUSD5O60279 629 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 ATP1B1P05026 303 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 HOXD4P09016 255 aaPredicted RBP12.57□□□□□ -0.4
PRPF18-202ENST00000378572 GDF1P27539 372 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 GPC1P35052 558 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 FEN1P39748 380 aaKnown RBP12.57□□□□□ -0.4
PRPF18-202ENST00000378572 CDK9P50750 372 aaKnown RBP12.57□□□□□ -0.4
PRPF18-202ENST00000378572 DUSP2Q05923 314 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 HSPB3Q12988 150 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 FADDQ13158 208 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 HLA-DQA1Q5Y7H0 255 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 DGAT2L6Q6ZPD8 337 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 SERPINA11Q86U17 422 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 CALHM3Q86XJ0 350 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 CCDC116Q8IYX3 515 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 OR10G3Q8NGC4 313 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 RIT1Q92963 219 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 NEURL3Q96EH8 262 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 ZNF583Q96ND8 569 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 DOHHQ9BU89 302 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 ZNF703Q9H7S9 590 aaPredicted RBP12.57□□□□□ -0.4
PRPF18-202ENST00000378572 ZFP64Q9NPA5 681 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 NTMQ9P121 344 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 SPRR3Q9UBC9 169 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 Q9UFV3 132 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 HIVEP1P15822 2718 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 RNF103-CHMP3A0A140T963 221 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 FAM220BPB1ANY3 271 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 PLOD2O00469 737 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 HCN1O60741 890 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 SLC35E2P0CK97 266 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 GABRA1P14867 456 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 UQCRC1P31930 480 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 ELF3P78545 371 aaPredicted RBP12.57□□□□□ -0.4
PRPF18-202ENST00000378572 FOXO1Q12778 655 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 SAXO2Q658L1 398 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 BHLHB9Q6PI77 547 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 ZZZ3Q8IYH5 903 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 ST13P4Q8IZP2 240 aaPredicted RBP12.57□□□□□ -0.4
PRPF18-202ENST00000378572 TAGAPQ8N103 731 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 RNF148Q8N7C7 305 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 TNIP2Q8NFZ5 429 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 ZNF675Q8TD23 568 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 NRGNQ92686 78 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 CCDC124Q96CT7 223 aaKnown RBP12.57□□□□□ -0.4
PRPF18-202ENST00000378572 ZNF597Q96LX8 424 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 WWTR1Q9GZV5 400 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 BCAP29Q9UHQ4 241 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 PACSIN3Q9UKS6 424 aa12.57□□□□□ -0.4
PRPF18-202ENST00000378572 A0A1B0GVC2 190 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 A0A1W2PS29 197 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 TRAPPC6AO75865 159 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 NADKO95544 446 aaPredicted RBP12.56□□□□□ -0.4
PRPF18-202ENST00000378572 IGKV3-11P04433 115 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 BMP2P12643 396 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 GALNSP34059 522 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 SOAT1P35610 550 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 ADH7P40394 386 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 MASP1P48740 699 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 CCT3P49368 545 aaKnown RBP12.56□□□□□ -0.4
PRPF18-202ENST00000378572 GZMMP51124 257 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 MVDP53602 400 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 ACTR3P61158 418 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 TXNL4AP83876 142 aaKnown RBP12.56□□□□□ -0.4
PRPF18-202ENST00000378572 SNTB1Q13884 538 aaKnown RBP12.56□□□□□ -0.4
PRPF18-202ENST00000378572 TOMM20Q15388 145 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 TESK1Q15569 626 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 ZNF791Q3KP31 576 aaPredicted RBP12.56□□□□□ -0.4
PRPF18-202ENST00000378572 SLC25A35Q3KQZ1 300 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 C1orf146Q5VVC0 180 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 RTL6Q6ICC9 239 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 SPNS3Q6ZMD2 512 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 DND1Q8IYX4 353 aaKnown RBP12.56□□□□□ -0.4
PRPF18-202ENST00000378572 SLC15A4Q8N697 577 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 OR56A1Q8NGH5 318 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 OR10A6Q8NH74 314 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 PAQR8Q8TEZ7 354 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 DIO2Q92813 273 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 ELP4Q96EB1 424 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 FAM120BQ96EK7 910 aaKnown RBP12.56□□□□□ -0.4
PRPF18-202ENST00000378572 REXO5Q96IC2 774 aaKnown RBP12.56□□□□□ -0.4
PRPF18-202ENST00000378572 KCTD14Q9BQ13 255 aaPredicted RBP12.56□□□□□ -0.4
PRPF18-202ENST00000378572 DENND2DQ9H6A0 471 aaPredicted RBP12.56□□□□□ -0.4
PRPF18-202ENST00000378572 DNAJB12Q9NXW2 375 aaKnown RBP12.56□□□□□ -0.4
PRPF18-202ENST00000378572 CNIH4Q9P003 139 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 SNX8Q9Y5X2 465 aa12.56□□□□□ -0.4
PRPF18-202ENST00000378572 A0A087WV62 115 aa12.55□□□□□ -0.4
PRPF18-202ENST00000378572 ACOT8O14734 319 aa12.55□□□□□ -0.4
PRPF18-202ENST00000378572 EMC8O43402 210 aa12.55□□□□□ -0.4
PRPF18-202ENST00000378572 BCAS2O75934 225 aaPredicted RBP12.55□□□□□ -0.4
PRPF18-202ENST00000378572 RFPL3SP0C7P2 107 aa12.55□□□□□ -0.4
PRPF18-202ENST00000378572 CHI3L1P36222 383 aaPredicted RBP12.55□□□□□ -0.4
PRPF18-202ENST00000378572 PRR5P85299 388 aa12.55□□□□□ -0.4
PRPF18-202ENST00000378572 RGNQ15493 299 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms