RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 ZNF136P52737 540 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 DGKQP52824 942 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 CLNS1AP54105 237 aaKnown RBP15.23■□□□□ 0.03
HMGN4-201ENST00000377575 B3GALT5-AS1P59052 145 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 HBA1P69905 142 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 BCL2A1Q16548 175 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 DPY19L1Q2PZI1 675 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 GLYR1Q49A26 553 aaPredicted RBP15.23■□□□□ 0.03
HMGN4-201ENST00000377575 CHMP1BQ7LBR1 199 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 MEIOBQ8N635 442 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 RELL2Q8NC24 303 aaPredicted RBP15.23■□□□□ 0.03
HMGN4-201ENST00000377575 OR8J2Q8NGG1 315 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 UCN2Q96RP3 112 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 ACBD3Q9H3P7 528 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 PNPOQ9NVS9 261 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 GPATCH2Q9NW75 528 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 KCNN3Q9UGI6 736 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 MYO9AB2RTY4 2548 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 MED12LQ86YW9 2145 aa15.23■□□□□ 0.03
HMGN4-201ENST00000377575 TRPC5OSA6NMA1 111 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 SNNO75324 88 aaPredicted RBP15.22■□□□□ 0.03
HMGN4-201ENST00000377575 IL18BPO95998 194 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 TMIGD3P0DMS9 266 aaPredicted RBP15.22■□□□□ 0.03
HMGN4-201ENST00000377575 EEFSECP57772 596 aaKnown RBP15.22■□□□□ 0.03
HMGN4-201ENST00000377575 TLE4Q04727 773 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 CASP8Q14790 479 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 CCNJQ5T5M9 372 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 ANXA8L1Q5VT79 327 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 OR4F3Q6IEY1 312 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 OGFOD2Q6N063 350 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 APOOLQ6UXV4 268 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 ADGRE4PQ86SQ3 457 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 GRAMD2AQ8IUY3 354 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 C9orf106Q8NAJ2 232 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 ZNF527Q8NB42 609 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 VPS37AQ8NEZ2 397 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 OR4C3Q8NH37 302 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 OR5AK3PQ8NH89 298 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 NUDT8Q8WV74 236 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 WNT2BQ93097 391 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 TESCQ96BS2 214 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 MS4A3Q96HJ5 214 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 LURAP1Q96LR2 239 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 CLCF1Q9UBD9 225 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 FOXD3Q9UJU5 478 aaPredicted RBP15.22■□□□□ 0.03
HMGN4-201ENST00000377575 PCDHGB4Q9UN71 923 aa15.22■□□□□ 0.03
HMGN4-201ENST00000377575 A0A087WZY1 265 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 A0A1W2PQD3 144 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 SLCO1B7G3V0H7 640 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 H3BML4 177 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 HDAC3O15379 428 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 ZNF17P17021 662 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 UQCRC1P31930 480 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 MYBPHQ13203 477 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 FBXL19-AS1Q494R0 122 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 DCST2Q5T1A1 773 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 ZAR1Q86SH2 424 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 UBQLNLQ8IYU4 475 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 CLECL1Q8IZS7 167 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 GATSQ8NAP1 163 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 OR4A15Q8NGL6 344 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 SLC35G5Q96KT7 338 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 ZNF559Q9BR84 538 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 SFXN3Q9BWM7 321 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 HOXD1Q9GZZ0 328 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 MCCC2Q9HCC0 563 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 STOML1Q9UBI4 398 aa15.21■□□□□ 0.03
HMGN4-201ENST00000377575 MARCOQ9UEW3 520 aaPredicted RBP15.21■□□□□ 0.03
HMGN4-201ENST00000377575 TACC2O95359 2948 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 ANKHD1Q8IWZ3 2542 aaKnown RBP15.2■□□□□ 0.02
HMGN4-201ENST00000377575 CSMD2Q7Z408 3487 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 RNF103-CHMP3A0A140T963 221 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 OR2M5A3KFT3 312 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 DUXAA6NLW8 204 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 ENO4A6NNW6 628 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 EEF1E1-BLOC1S5C9J1V9 151 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 E9PBE3 544 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 SDHDO14521 159 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 EEF1E1O43324 174 aaKnown RBP15.2■□□□□ 0.02
HMGN4-201ENST00000377575 HCRTR2O43614 444 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 GMFGO60234 142 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 RCBTB2O95199 551 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 AK1P00568 194 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 ZNF41P51814 821 aaPredicted RBP15.2■□□□□ 0.02
HMGN4-201ENST00000377575 AGBL2Q5U5Z8 902 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 ARSKQ6UWY0 536 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 P4HA3Q7Z4N8 544 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 SPATA19Q7Z5L4 167 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 MTERF4Q7Z6M4 381 aaKnown RBP15.2■□□□□ 0.02
HMGN4-201ENST00000377575 RNASE6Q93091 150 aaKnown RBP15.2■□□□□ 0.02
HMGN4-201ENST00000377575 ZBTB8AQ96BR9 441 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 OR7D2Q96RA2 312 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 SH3GL2Q99962 352 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 MANSC1Q9H8J5 431 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 FBXO34Q9NWN3 711 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 VDAC3Q9Y277 283 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 L3MBTL1Q9Y468 752 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 AP4B1Q9Y6B7 739 aa15.2■□□□□ 0.02
HMGN4-201ENST00000377575 PRSS51A0A1B0GVH4 220 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 H3BNH8 94 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms