RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 CRHP06850 196 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 BCKDHAP12694 445 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 MAPK1P28482 360 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 ADSLP30566 484 aaPredicted RBP17.26■□□□□ 0.35
CBWD3-204ENST00000377349 KIR2DL2P43627 348 aaPredicted RBP17.26■□□□□ 0.35
CBWD3-204ENST00000377349 ASMTP46597 345 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 TPD52P55327 224 aaPredicted RBP17.26■□□□□ 0.35
CBWD3-204ENST00000377349 GRAMD1BQ3KR37 738 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 VPS26BQ4G0F5 336 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 ATP6AP1LQ52LC2 224 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 FIGNL1Q6PIW4 674 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 BTLAQ7Z6A9 289 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 GATSQ8NAP1 163 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 OR2M3Q8NG83 312 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 DUSP19Q8WTR2 217 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 FIG4Q92562 907 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 PPP1R36Q96LQ0 422 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 ROPN1BQ9BZX4 212 aaPredicted RBP17.26■□□□□ 0.35
CBWD3-204ENST00000377349 PTGES2Q9H7Z7 377 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 ROPN1Q9HAT0 212 aaPredicted RBP17.26■□□□□ 0.35
CBWD3-204ENST00000377349 NDRG3Q9UGV2 375 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 ABCG2Q9UNQ0 655 aa17.26■□□□□ 0.35
CBWD3-204ENST00000377349 NUP214P35658 2090 aaPredicted RBP17.26■□□□□ 0.35
CBWD3-204ENST00000377349 CADP27708 2225 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 FADS1O60427 444 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 CGAP01215 116 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 HEXAP06865 529 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 LOXP28300 417 aaPredicted RBP17.25■□□□□ 0.35
CBWD3-204ENST00000377349 SUCLG1P53597 346 aaKnown RBP17.25■□□□□ 0.35
CBWD3-204ENST00000377349 Q5PR19 223 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 CLEC9AQ6UXN8 241 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 C22orf34Q6ZV56 151 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 R3HCC1LQ7Z5L2 792 aaKnown RBP17.25■□□□□ 0.35
CBWD3-204ENST00000377349 CIARTQ8N365 385 aaPredicted RBP17.25■□□□□ 0.35
CBWD3-204ENST00000377349 FNDC5Q8NAU1 212 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 OR7A2PQ8NGA2 310 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 COX4I2Q96KJ9 171 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 PPP3R2Q96LZ3 170 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 MS4A4EQ96PG1 132 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 PIP5K1AQ99755 562 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 OPN3Q9H1Y3 402 aaPredicted RBP17.25■□□□□ 0.35
CBWD3-204ENST00000377349 FAM120CQ9NX05 1096 aaKnown RBP17.25■□□□□ 0.35
CBWD3-204ENST00000377349 KLHL28Q9NXS3 571 aa17.25■□□□□ 0.35
CBWD3-204ENST00000377349 EIF3LQ9Y262 564 aaKnown RBP17.25■□□□□ 0.35
CBWD3-204ENST00000377349 SLC22A20A6NK97 555 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 SHISA8B8ZZ34 492 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 CASKO14936 926 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 SMNDC1O75940 238 aaKnown RBP eCLIP17.24■□□□□ 0.35
CBWD3-204ENST00000377349 HSPA4LO95757 839 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 IGKV1D-16P01601 117 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 CRYGSP22914 178 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 CD79BP40259 229 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 PTGR1Q14914 329 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 GUSBP1Q15486 140 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 SPDYE7PQ495Y7 208 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 NUDCD3Q8IVD9 361 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 LRRC75A-AS1Q8N1F1 130 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 COX18Q8N8Q8 333 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 CNEP1R1Q8N9A8 125 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 CDRT4Q8N9R6 151 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 CEP70Q8NHQ1 597 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 CAVIN3Q969G5 261 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 TUBGCP3Q96CW5 907 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 FCRL1Q96LA6 429 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 ZCCHC3Q9NUD5 404 aaKnown RBP17.24■□□□□ 0.35
CBWD3-204ENST00000377349 VDAC3Q9Y277 283 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 COL6A5A8TX70 2615 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 ATRQ13535 2644 aa17.24■□□□□ 0.35
CBWD3-204ENST00000377349 NPIPB8E9PQR5 432 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 SCAMP2O15127 329 aaKnown RBP17.23■□□□□ 0.35
CBWD3-204ENST00000377349 RGS16O15492 202 aaPredicted RBP17.23■□□□□ 0.35
CBWD3-204ENST00000377349 EMC8O43402 210 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 LYPLA1O75608 230 aaPredicted RBP17.23■□□□□ 0.35
CBWD3-204ENST00000377349 ANGPTL1O95841 491 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 BPGMP07738 259 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 FGF4P08620 206 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 ACP2P11117 423 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 PEPDP12955 493 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 HPGDP15428 266 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 DDX5P17844 614 aaKnown RBP17.23■□□□□ 0.35
CBWD3-204ENST00000377349 UGT3A2Q3SY77 523 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 CCNJQ5T5M9 372 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 OR2A2Q6IF42 318 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 WDR93Q6P2C0 686 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 MEIOBQ8N635 442 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 PGM2Q96G03 612 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 C16orf58Q96GQ5 468 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 C3orf30Q96M34 536 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 HS3ST6Q96QI5 342 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 RNF122Q9H9V4 155 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 ZDHHC2Q9UIJ5 367 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 ZNF337Q9Y3M9 751 aa17.23■□□□□ 0.35
CBWD3-204ENST00000377349 LY6G6DO95868 133 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 ALOX5P09917 674 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 ARRB2P32121 409 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 UGT2B10P36537 528 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 RNF144AP50876 292 aaPredicted RBP17.22■□□□□ 0.35
CBWD3-204ENST00000377349 SIRPAP78324 504 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 PRR5P85299 388 aa17.22■□□□□ 0.35
CBWD3-204ENST00000377349 TP53BP2Q13625 1128 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms