RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 TBXA2RP21731 343 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 ITPKBP27987 946 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 CLK3P49761 638 aaKnown RBP11.89□□□□□ -0.51
CBWD3-203ENST00000377344 KCNJ10P78508 379 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 NTRK2Q16620 822 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 ZNF791Q3KP31 576 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-203ENST00000377344 IFI44LQ53G44 452 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 TBCELQ5QJ74 424 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 MRPL2Q5T653 305 aaKnown RBP11.89□□□□□ -0.51
CBWD3-203ENST00000377344 ZNF468Q5VIY5 522 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-203ENST00000377344 AP1ARQ63HQ0 302 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 NUP54Q7Z3B4 507 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 ADGRG5Q8IZF4 528 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 CLIP4Q8N3C7 705 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 VANGL1Q8TAA9 524 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-203ENST00000377344 POP5Q969H6 163 aaKnown RBP11.89□□□□□ -0.51
CBWD3-203ENST00000377344 NODALQ96S42 347 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 RSPO3Q9BXY4 272 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-203ENST00000377344 METTL7AQ9H8H3 244 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.89□□□□□ -0.51
CBWD3-203ENST00000377344 KLHL28Q9NXS3 571 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 KLRF1Q9NZS2 232 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 SSUH2Q9Y2M2 353 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 DTNAQ9Y4J8 743 aa11.89□□□□□ -0.51
CBWD3-203ENST00000377344 TMEM229AB2RXF0 380 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 H0Y3Z8 333 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 H3BNH8 94 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 CYP7B1O75881 506 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 KRT36O76013 467 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 EVI2BP34910 448 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 CASRP41180 1078 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 CYB561P49447 251 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 EEF1A1P68104 462 aaKnown RBP11.88□□□□□ -0.51
CBWD3-203ENST00000377344 KLHL26Q53HC5 615 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 EIPR1Q53HC9 387 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 DHRS4L2Q6PKH6 230 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 ERMP1Q7Z2K6 904 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 MARCH3Q86UD3 253 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 DND1Q8IYX4 353 aaKnown RBP11.88□□□□□ -0.51
CBWD3-203ENST00000377344 CYP4Z2PQ8N1L4 340 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 GOLM1Q8NBJ4 401 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 PHOSPHO1Q8TCT1 267 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 GEMIN6Q8WXD5 167 aaKnown RBP11.88□□□□□ -0.51
CBWD3-203ENST00000377344 ZCCHC14Q8WYQ9 949 aaKnown RBP11.88□□□□□ -0.51
CBWD3-203ENST00000377344 TTC9Q92623 222 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 HGDQ93099 445 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 AP4S1Q9Y587 144 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 SERINC4A6NH21 518 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 hCG_2039718K7EN88 272 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 M0R3H8 397 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 GTPBP1O00178 669 aaKnown RBP11.88□□□□□ -0.51
CBWD3-203ENST00000377344 FRS3O43559 492 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 NDUFB5O43674 189 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 FKBP6O75344 327 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 CSTAP01040 98 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 UBTFL6P0CB48 400 aaPredicted RBP11.88□□□□□ -0.51
CBWD3-203ENST00000377344 RAP2AP10114 183 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 SLC7A1P30825 629 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 SOX8P57073 446 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 FGFBP1Q14512 234 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 BICRALQ6AI39 1079 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 ISLR2Q6UXK2 745 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 APOOLQ6UXV4 268 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 COMTD1Q86VU5 262 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 CARM1Q86X55 608 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 POGLUT1Q8NBL1 392 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 FDCSPQ8NFU4 85 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 GRHL3Q8TE85 626 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 SLCO4A1Q96BD0 722 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 UTP23Q9BRU9 249 aaKnown RBP11.88□□□□□ -0.51
CBWD3-203ENST00000377344 MAGIXQ9H6Y5 334 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 CCM2LQ9NUG4 571 aaPredicted RBP11.88□□□□□ -0.51
CBWD3-203ENST00000377344 PLA2G3Q9NZ20 509 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 SLC9A8Q9Y2E8 581 aa11.88□□□□□ -0.51
CBWD3-203ENST00000377344 APC2O95996 2303 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 DOCK10Q96BY6 2186 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 DMXL2Q8TDJ6 3036 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 C2orf72A6NCS6 295 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 PRAMEF25A6NGN4 478 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 FADS1O60427 444 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 ANGPTL1O95841 491 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 WDPCPO95876 746 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 EPPINO95925 133 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 LGI1O95970 557 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 IFNW1P05000 195 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 FABP3P05413 133 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 NGFRP08138 427 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 HLCSP50747 726 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 UCNP55089 124 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 TMPRSS3P57727 454 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 RPP38P78345 283 aaKnown RBP11.87□□□□□ -0.51
CBWD3-203ENST00000377344 CD226Q15762 336 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 PRAMEF20Q5VT98 475 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 RNF220Q5VTB9 566 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 ZFP1Q6P2D0 407 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 ZDHHC21Q8IVQ6 265 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 APLFQ8IW19 511 aaPredicted RBP11.87□□□□□ -0.51
CBWD3-203ENST00000377344 TMCO5AQ8N6Q1 288 aa11.87□□□□□ -0.51
CBWD3-203ENST00000377344 APOBEC4Q8WW27 367 aaKnown RBP11.87□□□□□ -0.51
CBWD3-203ENST00000377344 CHID1Q9BWS9 393 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms