RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 MYADMQ96S97 322 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 OR51B6Q9H340 312 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 ZBTB20Q9HC78 741 aaPredicted RBP11.82□□□□□ -0.52
VPS13A-204ENST00000376634 MYEF2Q9P2K5 600 aaKnown RBP11.82□□□□□ -0.52
VPS13A-204ENST00000376634 SLC6A14Q9UN76 642 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 DOCK8Q8NF50 2099 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 KIAA0355O15063 1070 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 RNGTTO60942 597 aaKnown RBP11.82□□□□□ -0.52
VPS13A-204ENST00000376634 SERPINA5P05154 406 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 SHFQ7M4L6 423 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 OR4N5Q8IXE1 308 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 OR4K13Q8NH42 304 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 MGLLQ99685 303 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF286AQ9HBT8 521 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 MCTS1Q9ULC4 181 aaKnown RBP11.82□□□□□ -0.52
VPS13A-204ENST00000376634 ETFAP13804 333 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 ARHGAP1Q07960 439 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 PEA15Q15121 130 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 NXPE4Q6UWF7 544 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 ZDHHC24Q6UX98 284 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 UPRTQ96BW1 309 aa11.82□□□□□ -0.52
VPS13A-204ENST00000376634 MEGF11A6BM72 1044 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 ANKRD30BLA7E2S9 258 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 MC3RP41968 323 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 SULF2Q8IWU5 870 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 SVBPQ8N300 66 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 HAVCR2Q8TDQ0 301 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 KCNK12Q9HB15 430 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 GPR160Q9UJ42 338 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 A0A1W2PPW3 197 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 RNF4P78317 190 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 LARP4Q71RC2 724 aaKnown RBP eCLIP11.81□□□□□ -0.52
VPS13A-204ENST00000376634 CLEC1AQ8NC01 280 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 TEX10Q9NXF1 929 aaPredicted RBP11.81□□□□□ -0.52
VPS13A-204ENST00000376634 CD300LBA8K4G0 201 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 CLCN2P51788 898 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 ARL16Q0P5N6 197 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 PLCXD3Q63HM9 321 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 C3orf49Q96BT1 292 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 MRI1Q9BV20 369 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 BTAF1O14981 1849 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 AKAIN1P0CW23 69 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 JUPP14923 745 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 ARSBP15848 533 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 NFATC4Q14934 902 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 ZFP41Q8N8Y5 198 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 OR1J4Q8NGS1 313 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 OR8K5Q8NH50 307 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 FOXJ1Q92949 421 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 TESQ9UGI8 421 aaKnown RBP11.81□□□□□ -0.52
VPS13A-204ENST00000376634 CA14Q9ULX7 337 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 SLC6A5Q9Y345 797 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 HSPE1-MOB4S4R3N1 261 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 NID2Q14112 1375 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 A0A1W2PQL4 384 aaPredicted RBP11.81□□□□□ -0.52
VPS13A-204ENST00000376634 TRAPPC13A5PLN9 417 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 A6NHS1 94 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 K7EPK0 472 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 OR7A17O14581 309 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 STK19P49842 368 aaPredicted RBP11.81□□□□□ -0.52
VPS13A-204ENST00000376634 ZNF92Q03936 586 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 SLC10A1Q14973 349 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 CCL14Q16627 93 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 FAM71E2Q8N5Q1 922 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 GDPD1Q8N9F7 314 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 RBMXL1Q96E39 390 aaKnown RBP11.81□□□□□ -0.52
VPS13A-204ENST00000376634 COCHO43405 550 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 KCNE1P15382 129 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 PROZP22891 400 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 GKP32189 559 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 THBS3P49746 956 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 MEX3BQ6ZN04 569 aaKnown RBP11.81□□□□□ -0.52
VPS13A-204ENST00000376634 CHCHD4Q8N4Q1 142 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 NLGN4YQ8NFZ3 816 aaPredicted RBP11.81□□□□□ -0.52
VPS13A-204ENST00000376634 LGALS12Q96DT0 336 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 BSCL2Q96G97 398 aaPredicted RBP11.81□□□□□ -0.52
VPS13A-204ENST00000376634 KLHL42Q9P2K6 505 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 B4GALT6Q9UBX8 382 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 GPR52Q9Y2T5 361 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 C20orf202A1L168 122 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 SOD2P04179 222 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 SLC2A1P11166 492 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 SUOXP51687 545 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 GRM7Q14831 915 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 UPP1Q16831 310 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 SBSNQ6UWP8 590 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 SLC45A3Q96JT2 553 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 SFXN2Q96NB2 322 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 MINDY3Q9H8M7 445 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 SMCO4Q9NRQ5 59 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 BPIP17213 487 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 SFRP5Q5T4F7 317 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 MAL2Q969L2 176 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 ENKD1Q9H0I2 346 aa11.81□□□□□ -0.52
VPS13A-204ENST00000376634 GVINP1Q7Z2Y8 2422 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 SLC22A5O76082 557 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 RTL6Q6ICC9 239 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 PAPD4Q6PIY7 484 aaKnown RBP11.8□□□□□ -0.52
VPS13A-204ENST00000376634 FAM217AQ8IXS0 508 aa11.8□□□□□ -0.52
VPS13A-204ENST00000376634 NPRL2Q8WTW4 380 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms