RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 RFX2P48378 723 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 FBXW4P57775 412 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CSNK1G2P78368 415 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ATCAYQ86WG3 371 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MKRN2Q9H000 416 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PCBD2Q9H0N5 130 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TSC2P49815 1807 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 AGAP14A8MT82 685 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 LRRN3E7EW58 273 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 IGHA2P01877 340 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PRPH2P23942 346 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR12D2P58182 307 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 LCTLQ6UWM7 567 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 IKBIPQ70UQ0 350 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SRFBP1Q8NEF9 429 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PFN4Q8NHR9 129 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CNRIP1Q96F85 164 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CHST8Q9H2A9 424 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 LRRN3Q9H3W5 708 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 FN3KQ9H479 309 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 A4GNTQ9UNA3 340 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CHST2Q9Y4C5 530 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TEX13CA0A0J9YWL9 993 aa13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 IRGMA1A4Y4 181 aa13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FMO6PO60774 539 aa13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ARSBP15848 533 aa13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ELK1P19419 428 aa13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 BSGP35613 385 aa13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SHC2P98077 582 aa13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PRDX1Q06830 199 aaKnown RBP13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 RTL4Q6ZR62 310 aa13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TMC8Q8IU68 726 aa13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TMEM99Q8N816 258 aa13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SYNDIG1Q9H7V2 258 aa13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SRA1Q9HD15 236 aaKnown RBP13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 MED31Q9Y3C7 131 aa13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TNS1Q9HBL0 1735 aaKnown RBP13.46□□□□□ -0.26
TNFRSF1B-201ENST00000376259 AHCYP23526 432 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 STOMP27105 288 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SNTB2Q13425 540 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ERV3-1Q14264 604 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PRRT3Q5FWE3 981 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FBXL6Q8N531 539 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR4M1Q8NGD0 313 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR4K14Q8NGD5 310 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR2T35Q8NGX2 323 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 RBM18Q96H35 190 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ST6GAL2Q96JF0 529 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 NKX3-1Q99801 234 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 POLDIP3Q9BY77 421 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 DPAGT1Q9H3H5 408 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 NARSO43776 548 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 B3GALT2O43825 422 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 KAT7O95251 611 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 HRGP04196 525 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ERP29P30040 261 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 MAGEB1P43366 347 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 RAB40BQ12829 278 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 AGERQ15109 404 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 NDUFAF6Q330K2 333 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 MINDY4Q4G0A6 757 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ZNF793Q6ZN11 406 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 GDPGP1Q6ZNW5 385 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 KIAA1958Q8N8K9 716 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR8S1Q8NH09 359 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PMEPA1Q969W9 287 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 DCLRE1CQ96SD1 692 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SGPP1Q9BX95 441 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PAK6Q9NQU5 681 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ZNF69Q9UC07 566 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FBXL4Q9UKA2 621 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 DIMT1Q9UNQ2 313 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 VEGFDO43915 354 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 MT-ND5P03915 603 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PTHLHP12272 177 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 HK1P19367 917 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FAPQ12884 760 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 LAS2Q8IYD9 372 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FBXO15Q8NCQ5 510 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR8D4Q8NGM9 314 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR5W2Q8NH69 310 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 CHFRQ96EP1 664 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 GAL3ST4Q96RP7 486 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 NDUFB11Q9NX14 153 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 STOML2Q9UJZ1 356 aa13.45□□□□□ -0.26
TNFRSF1B-201ENST00000376259 UNC119BA6NIH7 251 aa13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 DUXAA6NLW8 204 aa13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FAM25EA8MYX2 175 aa13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 H0Y8X5 98 aa13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PEX12O00623 359 aa13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 DNASE1P24855 282 aa13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ITGB8P26012 769 aa13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TRHRP34981 398 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 GPLD1P80108 840 aa13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 DOC2BQ14184 412 aa13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TRMT12Q53H54 448 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ZNF655Q8N720 491 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR5K2Q8NHB8 316 aa13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 RDH8Q9NYR8 311 aa13.44□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR6C2Q9NZP2 312 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms