RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 HLA-DMAP28067 261 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 PGM2L1Q6PCE3 622 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 ZNF679Q8IYX0 411 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 RLN3Q8WXF3 142 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 ZFYVE21Q9BQ24 234 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 OR51E2Q9H255 320 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 PCDHB10Q9UN67 800 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 CAMK2AQ9UQM7 478 aa12.94□□□□□ -0.34
COL4A1-201ENST00000375820 SOBPA7XYQ1 873 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 TIMP2P16035 220 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 SSTR2P30874 369 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 ACY1Q03154 408 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 ZNF33AQ06730 810 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 SPATS1Q496A3 300 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 SLC7A5P1Q8MH63 180 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 ENDOVQ8N8Q3 282 aaKnown RBP12.93□□□□□ -0.34
COL4A1-201ENST00000375820 BEST4Q8NFU0 473 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 OR6C2Q9NZP2 312 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 POM121CA8CG34 1229 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 KDM4EB2RXH2 506 aaPredicted RBP12.93□□□□□ -0.34
COL4A1-201ENST00000375820 RAB27BO00194 218 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 SULT1B1O43704 296 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 ZNF780AO75290 641 aaPredicted RBP12.93□□□□□ -0.34
COL4A1-201ENST00000375820 BCAS1O75363 584 aaPredicted RBP12.93□□□□□ -0.34
COL4A1-201ENST00000375820 FUT1P19526 365 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 C5AR1P21730 350 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 FOLR3P41439 243 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 SPOCK1Q08629 439 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 GK2Q14410 553 aaPredicted RBP12.93□□□□□ -0.34
COL4A1-201ENST00000375820 ZNF783Q6ZMS7 281 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 UMODL1-AS1Q8N2C9 162 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 OR7G2Q8NG99 324 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 OR52R1Q8NGF1 315 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 CNOT9Q92600 299 aaKnown RBP12.93□□□□□ -0.34
COL4A1-201ENST00000375820 MYH10P35580 1976 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 FAPQ12884 760 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 TMEM185AQ8NFB2 350 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 CNTNAP3BQ96NU0 1288 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 BAIAP2L2Q6UXY1 529 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 HSD17B8Q92506 261 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 ZNF845Q96IR2 970 aaPredicted RBP12.93□□□□□ -0.34
COL4A1-201ENST00000375820 MAF1Q9H063 256 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 RIMS3Q9UJD0 308 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 TCHHQ07283 1943 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 J3KTA2 159 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 PFKMP08237 780 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 RAB3AP20336 220 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 MSR1P21757 451 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 CRHBPP24387 322 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 MINDY1Q8N5J2 469 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 C3orf58Q8NDZ4 430 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 OR2T35Q8NGX2 323 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 NANOS1Q8WY41 292 aaKnown RBP12.93□□□□□ -0.34
COL4A1-201ENST00000375820 DCBLD2Q96PD2 775 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 SYT3Q9BQG1 590 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 HAPLN2Q9GZV7 340 aa12.93□□□□□ -0.34
COL4A1-201ENST00000375820 MAGED1Q9Y5V3 778 aaPredicted RBP12.93□□□□□ -0.34
COL4A1-201ENST00000375820 NID2Q14112 1375 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 ANKRD34BA5PLL1 514 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 ZNF705GA8MUZ8 300 aaPredicted RBP12.92□□□□□ -0.34
COL4A1-201ENST00000375820 SULT2B1O00204 365 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 LYRM1O43325 122 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 ZIC2O95409 532 aaPredicted RBP12.92□□□□□ -0.34
COL4A1-201ENST00000375820 OSMP13725 252 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 CXCR4P61073 352 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 CDKN3Q16667 212 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 TMEM31Q5JXX7 168 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 TMEM40Q8WWA1 233 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 HAS2Q92819 552 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 LMAN1LQ9HAT1 526 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 FAM86C1Q9NVL1 165 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 POLHQ9Y253 713 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 DUOX1Q9NRD9 1551 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 RAB3DO95716 219 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 SERPINE2P07093 398 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 CA3P07451 260 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 PRDX3P30048 256 aaKnown RBP12.92□□□□□ -0.34
COL4A1-201ENST00000375820 PRSS3P35030 304 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 RCAN2Q14206 197 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 TMEM53Q6P2H8 277 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 ZNF852Q6ZMS4 543 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 ISCA2Q86U28 154 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 PIGCQ92535 297 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 APMAPQ9HDC9 416 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 THSD1Q9NS62 852 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 ACTR10Q9NZ32 417 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 GMDSO60547 372 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 SC5DO75845 299 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 UGT2B7P16662 529 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 HRH2P25021 359 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 WNT7BP56706 349 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 ABHD12BQ7Z5M8 362 aaPredicted RBP12.92□□□□□ -0.34
COL4A1-201ENST00000375820 SIAH1Q8IUQ4 282 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 OR13J1Q8NGT2 312 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 NEIL2Q969S2 332 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 C4orf36Q96KX1 117 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 OR14A2Q96R54 314 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 LOC105369274A0A096LPK9 316 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 TRBV11-1A0A0K0K1C0 115 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 SLC9B1P1A6NJY1 282 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms