RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 GPR68Q15743 365 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 ZNF630Q2M218 657 aaPredicted RBP10.38□□□□□ -0.75
HSPG2-202ENST00000374676 RNFT1Q5M7Z0 435 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 BNC2Q6ZN30 1099 aaPredicted RBP10.38□□□□□ -0.75
HSPG2-202ENST00000374676 OLIG3Q7RTU3 272 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 TRPM8Q7Z2W7 1104 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 NET1Q7Z628 596 aaPredicted RBP10.38□□□□□ -0.75
HSPG2-202ENST00000374676 MARCH3Q86UD3 253 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 SLC22A16Q86VW1 577 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 CALHM3Q86XJ0 350 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 PLCZ1Q86YW0 608 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 MISPQ8IVT2 679 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 SIAH3Q8IW03 269 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 ZNF619Q8N2I2 560 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 WDSUB1Q8N9V3 476 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 ZNF527Q8NB42 609 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 OR1J4Q8NGS1 313 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 CPT1CQ8TCG5 803 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 NR4A3Q92570 626 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 TMEM19Q96HH6 336 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 ZNF597Q96LX8 424 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 SLC39A3Q9BRY0 314 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 SPATA9Q9BWV2 254 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 TTTY12Q9BZ98 90 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 TBL1XR1Q9BZK7 514 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 GALNT9Q9HCQ5 603 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 AGPAT4Q9NRZ5 378 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 ASF1BQ9NVP2 202 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 QPCTLQ9NXS2 382 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 SUCOQ9UBS9 1254 aaKnown RBP10.38□□□□□ -0.75
HSPG2-202ENST00000374676 KCNE5Q9UJ90 142 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 DTNAQ9Y4J8 743 aa10.38□□□□□ -0.75
HSPG2-202ENST00000374676 DSPPQ9NZW4 1301 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 NPIPA5A0A0B4J1W7 369 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 C5orf58C9J3I9 102 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 NPIPA7E9PJI5 369 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 H3BNH8 94 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 ACOT7O00154 380 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 NDUFB5O43674 189 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 SCO2O43819 266 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 UGT2B17O75795 530 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 CBR3O75828 277 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 NPIPA8P0DM63 369 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 ESRRAP11474 423 aaPredicted RBP10.37□□□□□ -0.75
HSPG2-202ENST00000374676 ZNF24P17028 368 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 MSX1P28360 303 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 NUDT2P50583 147 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 MLLT10P55197 1068 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 PPIAP62937 165 aaKnown RBP10.37□□□□□ -0.75
HSPG2-202ENST00000374676 CDK6Q00534 326 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 PLGLB1Q02325 96 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 KRTCAP3Q53RY4 240 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 PRR30Q53SZ7 412 aaPredicted RBP10.37□□□□□ -0.75
HSPG2-202ENST00000374676 RABL3Q5HYI8 236 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 REEP3Q6NUK4 255 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 PTOV1Q86YD1 416 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 SLC15A3Q8IY34 581 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 C11orf65Q8NCR3 313 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 OR10A6Q8NH74 314 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 BBS10Q8TAM1 723 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 DUSP19Q8WTR2 217 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 MED12Q93074 2177 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 MAL2Q969L2 176 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 ZG16BQ96DA0 208 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 DTNBP1Q96EV8 351 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 ZNF583Q96ND8 569 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 TREX2Q9BQ50 279 aaPredicted RBP10.37□□□□□ -0.75
HSPG2-202ENST00000374676 SLX1AQ9BQ83 275 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 ECSITQ9BQ95 431 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 RTN4RQ9BZR6 473 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 TRIM8Q9BZR9 551 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 UBQLN3Q9H347 655 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 RUBCNLQ9H714 662 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 ZDHHC11Q9H8X9 412 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 OLAHQ9NV23 265 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 CMTM6Q9NX76 183 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 B4GALT7Q9UBV7 327 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 MRPS18CQ9Y3D5 142 aaKnown RBP10.37□□□□□ -0.75
HSPG2-202ENST00000374676 FLNCQ14315 2725 aa10.37□□□□□ -0.75
HSPG2-202ENST00000374676 HELZ2Q9BYK8 2649 aaKnown RBP10.37□□□□□ -0.75
HSPG2-202ENST00000374676 C2orf72A6NCS6 295 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 SERINC4A6NH21 518 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 AGAP5A6NIR3 686 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 GNB5O14775 395 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 EIF4E2O60573 245 aaKnown RBP10.36□□□□□ -0.75
HSPG2-202ENST00000374676 PGM3O95394 542 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 BCHEP06276 602 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 DBIP07108 87 aaKnown RBP10.36□□□□□ -0.75
HSPG2-202ENST00000374676 RFPL3SP0C7P2 107 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 T-ENOLP0DO92 83 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 ETS2P15036 469 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 RPS4Y1P22090 263 aaKnown RBP10.36□□□□□ -0.75
HSPG2-202ENST00000374676 CALB2P22676 271 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 MST1P26927 711 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 RFC3P40938 356 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 CPA2P48052 419 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 PSME3P61289 254 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 C19orf57Q0VDD7 668 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 SCARB2Q14108 478 aa10.36□□□□□ -0.75
HSPG2-202ENST00000374676 FGFBP1Q14512 234 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms