RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 GTF2IRD2BQ6EKJ0 949 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 PPP4R4Q6NUP7 873 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 GTF2IRD2Q86UP8 949 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 STK32CQ86UX6 486 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 WFDC8Q8IUA0 241 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 ACTRT2Q8TDY3 377 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 AKAP1Q92667 903 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 ZBTB8AQ96BR9 441 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 L3HYPDHQ96EM0 354 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 HDHD5Q9BXW7 423 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 MYNNQ9NPC7 610 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 VDAC3Q9Y277 283 aa11.69□□□□□ -0.54
TRAPPC3-201ENST00000373159 CADP27708 2225 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 GXYLT2A0PJZ3 443 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 NDUFB5O43674 189 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 CXCL13O43927 109 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 NGFRP08138 427 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 NID1P14543 1247 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 IDUAP35475 653 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 MFSD12Q6NUT3 480 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 SYT10Q6XYQ8 523 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 ESPNLQ6ZVH7 1005 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 IKBIPQ70UQ0 350 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 TRIM46Q7Z4K8 759 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 GALNT10Q86SR1 603 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 MMGT1Q8N4V1 131 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 STEAP2Q8NFT2 490 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 OR4C3Q8NH37 302 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 OR2V1Q8NHB1 315 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 LILRB1Q8NHL6 650 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 OSTF1Q92882 214 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 TRMT61AQ96FX7 289 aaKnown RBP11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 KCNA7Q96RP8 456 aa11.68□□□□□ -0.54
TRAPPC3-201ENST00000373159 A0A087WUV0 522 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 A0A0J9YW62 118 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 A0A1W2PRB8 838 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 RNF223E7ERA6 249 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 GMFGO60234 142 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 NKX2-2O95096 273 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 OPN1LWP04000 364 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 TUBBP07437 444 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 DANCRP0C864 163 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 PABPC4LP0CB38 370 aaKnown RBP11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 PRPS2P11908 318 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 FOXA1P55317 472 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 CKAP4Q07065 602 aaKnown RBP11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 DMTNQ08495 405 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 SLC29A2Q14542 456 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 VPS26BQ4G0F5 336 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 PDSS1Q5T2R2 415 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 DNAJC14Q6Y2X3 702 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 CEP70Q8NHQ1 597 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 CDC26Q8NHZ8 85 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 RAB3IL1Q8TBN0 382 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 FAM110BQ8TC76 370 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 GPR151Q8TDV0 419 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 PIK3R3Q92569 461 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 S100PBPQ96BU1 408 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 NPAS1Q99742 590 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 TACO1Q9BSH4 297 aaKnown RBP11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 REG4Q9BYZ8 158 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 GSTO2Q9H4Y5 243 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 MID1IP1Q9NPA3 183 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 MED17Q9NVC6 651 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 NBEAL1Q6ZS30 2694 aa11.67□□□□□ -0.54
TRAPPC3-201ENST00000373159 UBFD1O14562 309 aaKnown RBP11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 TNFSF11O14788 317 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 TLX2O43763 284 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 GCM2O75603 506 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 OXSR1O95747 527 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 THBS1P07996 1170 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 SOD3P08294 240 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 ME2P23368 584 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 AGTR1P30556 359 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 LCN1P31025 176 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 ZNF41P51814 821 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 CARD18P57730 90 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 SLC18A2Q05940 514 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 ZNF844Q08AG5 666 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 VEZF1Q14119 521 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 PLPPR5Q32ZL2 321 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 GLE1Q53GS7 698 aaKnown RBP11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 NCMAPQ5T1S8 102 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 HBMQ6B0K9 141 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 NOXRED1Q6NXP6 359 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 ZNF551Q7Z340 670 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 TRABD2AQ86V40 505 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 MISPQ8IVT2 679 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 GABRG1Q8N1C3 465 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 CDRT4Q8N9R6 151 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 POC1BQ8TC44 478 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 SMAP2Q8WU79 429 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 HSD17B8Q92506 261 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 SLC9A6Q92581 669 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 FBXW5Q969U6 566 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 METTL2AQ96IZ6 378 aaKnown RBP11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 RNF145Q96MT1 663 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 FMO2Q99518 471 aa11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 USB1Q9BQ65 265 aaKnown RBP11.66□□□□□ -0.54
TRAPPC3-201ENST00000373159 IQCGQ9H095 443 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms