RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 SNTNA6NMZ2 147 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 B4DGG1 531 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 TSPAN19P0C672 248 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 LIMS3P0CW19 117 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 LIMS4P0CW20 117 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 RFX3P48380 749 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 SPANXN2Q5MJ10 180 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 AADACL4Q5VUY2 407 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 HSDL2Q6YN16 418 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 LHFPL3Q86UP9 236 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 OOSP2Q86WS3 158 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 OR4F15Q8NGB8 312 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 GDF15Q99988 308 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 PRRG3Q9BZD7 231 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 DPH1Q9BZG8 443 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 TXNL4BQ9NX01 149 aaKnown RBP17.41■□□□□ 0.38
USP49-202ENST00000373010 NLGN3Q9NZ94 848 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 CSNK1G3Q9Y6M4 447 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 CDH10Q9Y6N8 788 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 A0A075B6Q4 140 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 ISPDA4D126 451 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 TRAPPC13A5PLN9 417 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 OR5K4A6NMS3 321 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 NID1P14543 1247 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 CCR5P51681 352 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 RPS25P62851 125 aaKnown RBP17.4■□□□□ 0.38
USP49-202ENST00000373010 OR1Q1Q15612 314 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 PFN4Q8NHR9 129 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 RLN3Q8WXF3 142 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 TOR4AQ9NXH8 423 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 SATB2Q9UPW6 733 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 SPTBP11277 2137 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 TMEM129A0AVI4 362 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 TNFSF8P32971 234 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 MANEAQ5SRI9 462 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 AGAP7PQ5VUJ5 663 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 C22orf42Q6IC83 251 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 LAPTM4BQ86VI4 370 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 FAM160A2Q8N612 972 aaPredicted RBP17.4■□□□□ 0.38
USP49-202ENST00000373010 ZFP41Q8N8Y5 198 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 ZDHHC1Q8WTX9 485 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 CEP19Q96LK0 163 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 STACQ99469 402 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 C20orf141Q9NUB4 165 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 IRAK4Q9NWZ3 460 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 CRNNQ9UBG3 495 aaPredicted RBP17.4■□□□□ 0.38
USP49-202ENST00000373010 PRUNE2Q8WUY3 3088 aa17.4■□□□□ 0.38
USP49-202ENST00000373010 IRGMA1A4Y4 181 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 CDHR4A6H8M9 788 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 RGS5O15539 181 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 CDRT1O95170 752 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 ZGLP1P0C6A0 271 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 CLEC2LP0C7M8 214 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 ETV6P41212 452 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 MAP3K8P41279 467 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 RAB38P57729 211 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 POU6F2P78424 691 aaPredicted RBP17.39■□□□□ 0.37
USP49-202ENST00000373010 ZNF155Q12901 538 aaPredicted RBP17.39■□□□□ 0.37
USP49-202ENST00000373010 ARMC6Q6NXE6 501 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 AVL9Q8NBF6 648 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 OR52R1Q8NGF1 315 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 ATP13A2Q9NQ11 1180 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 ZNF223Q9UK11 482 aaPredicted RBP17.39■□□□□ 0.37
USP49-202ENST00000373010 POMT2Q9UKY4 750 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 EXOSC1Q9Y3B2 195 aaKnown RBP17.39■□□□□ 0.37
USP49-202ENST00000373010 UGT2A1Q9Y4X1 527 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 FAM183AA6NL82 134 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 SOCS6O14544 535 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 CHST10O43529 356 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 LYPD3O95274 346 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 CBX7O95931 251 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 SPNP16150 400 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 MAKP20794 623 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 GCGRP47871 477 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 RORCP51449 518 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 PLAURQ03405 335 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 TOR1AIP2Q8NFQ8 470 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 OR2T33Q8NG76 320 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 OTULINQ96BN8 352 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 CTHRC1Q96CG8 243 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 SDHCQ99643 169 aaPredicted RBP17.39■□□□□ 0.37
USP49-202ENST00000373010 ENKD1Q9H0I2 346 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 UBQLN3Q9H347 655 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 SEMA6CQ9H3T2 930 aa17.39■□□□□ 0.37
USP49-202ENST00000373010 UNC119BA6NIH7 251 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 MAZP56270 477 aaKnown RBP17.38■□□□□ 0.37
USP49-202ENST00000373010 FXYD6P3P58550 94 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 BNC1Q01954 994 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 DBPQ10586 325 aaPredicted RBP17.38■□□□□ 0.37
USP49-202ENST00000373010 TM9SF2Q99805 663 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 SLC30A2Q9BRI3 323 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 TEX12Q9BXU0 123 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 HINT3Q9NQE9 182 aaKnown RBP17.38■□□□□ 0.37
USP49-202ENST00000373010 ERVK13-1Q9NX77 482 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 OR10H2O60403 315 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 IGLV3-19P01714 112 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 IFI30P13284 250 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 SLC1A3P43003 542 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 B3GLCTQ6Y288 498 aa17.38■□□□□ 0.37
USP49-202ENST00000373010 CPOQ8IVL8 374 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms