RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 KIAA0907Q7Z7F0 614 aaPredicted RBP12.8□□□□□ -0.36
USP49-201ENST00000373006 MRGPREQ86SM8 312 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 ADIPOR2Q86V24 386 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 LRRTM4Q86VH4 590 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 ZNF547Q8IVP9 402 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 CRIPAKQ8N1N5 446 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 TMEM99Q8N816 258 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 OR8K5Q8NH50 307 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 ST8SIA4Q92187 359 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 TOE1Q96GM8 510 aaKnown RBP12.8□□□□□ -0.36
USP49-201ENST00000373006 SAMD8Q96LT4 415 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 RBP7Q96R05 134 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 SLC46A2Q9BY10 475 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 RBCK1Q9BYM8 510 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 ZDHHC5Q9C0B5 715 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 BABAM2Q9NXR7 383 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 MRPL15Q9P015 296 aaKnown RBP12.8□□□□□ -0.36
USP49-201ENST00000373006 SLC13A4Q9UKG4 626 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 RPS10-NUDT3A0A1W2PQS6 291 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 SLC9B1P1A6NJY1 282 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 KPNA3O00505 521 aaPredicted RBP12.79□□□□□ -0.36
USP49-201ENST00000373006 OR1F1O43749 312 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 SOX30O94993 753 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 ANKRD34CP0C6C1 535 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 DGCR2P98153 550 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 NDUFAF5Q5TEU4 345 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 BBS10Q8TAM1 723 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 BBS4Q96RK4 519 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 UBL7Q96S82 380 aaPredicted RBP12.79□□□□□ -0.36
USP49-201ENST00000373006 DPH7Q9BTV6 452 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 ALG8Q9BVK2 526 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 KCNN2Q9H2S1 579 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 NLGN3Q9NZ94 848 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 SYNDIG1LA6NDD5 238 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 GPR171O14626 319 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 EFEMP2O95967 443 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 SOD2P04179 222 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 PAICSP22234 425 aaKnown RBP12.79□□□□□ -0.36
USP49-201ENST00000373006 ACVR1BP36896 505 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 IFNGR2P38484 337 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 MAPK9P45984 424 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 RFX3P48380 749 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 MTNR1BP49286 362 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 CLCNKAP51800 687 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 E2F1Q01094 437 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 COL28A1Q2UY09 1125 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 ZNF658BQ4V348 819 aaPredicted RBP12.79□□□□□ -0.36
USP49-201ENST00000373006 C6orf132Q5T0Z8 1188 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 ZNF697Q5TEC3 545 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 PRSS45Q7RTY3 260 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 KANSL1Q7Z3B3 1105 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 CEACAM19Q7Z692 300 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 OR52N1Q8NH53 320 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 LILRB1Q8NHL6 650 aaPredicted RBP12.79□□□□□ -0.36
USP49-201ENST00000373006 PIGXQ8TBF5 258 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 TMEM255BQ8WV15 326 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 GIMAP1Q8WWP7 306 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 KAT2AQ92830 837 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 MARVELD3Q96A59 401 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 SPATA5L1Q9BVQ7 753 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 LINC01387J3KSC0 135 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 CDC42EP2O14613 210 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 KIAA0355O15063 1070 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 KCNJ13O60928 360 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 LILRB5O75023 590 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 IGHA1P01876 353 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 MRPL3P09001 348 aaKnown RBP12.79□□□□□ -0.36
USP49-201ENST00000373006 HTR1FP30939 366 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 ERVK-21P61565 698 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 FGL2Q14314 439 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 TRAM2Q15035 370 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 CD276Q5ZPR3 534 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 NUDT13Q86X67 352 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 OR10H4Q8NGA5 316 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 OR4D9Q8NGE8 314 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 OR2T35Q8NGX2 323 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 TTTY10Q9BZA0 68 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 MRPL39Q9NYK5 338 aaKnown RBP12.79□□□□□ -0.36
USP49-201ENST00000373006 UBQLN2Q9UHD9 624 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 EXOGQ9Y2C4 368 aaKnown RBP12.79□□□□□ -0.36
USP49-201ENST00000373006 AUP1Q9Y679 476 aa12.79□□□□□ -0.36
USP49-201ENST00000373006 CACNB4O00305 520 aaPredicted RBP12.78□□□□□ -0.36
USP49-201ENST00000373006 SLC9A3R1O14745 358 aaPredicted RBP12.78□□□□□ -0.36
USP49-201ENST00000373006 PGRMC2O15173 223 aa12.78□□□□□ -0.36
USP49-201ENST00000373006 HOXA2O43364 376 aa12.78□□□□□ -0.36
USP49-201ENST00000373006 LCMT2O60294 686 aaKnown RBP12.78□□□□□ -0.36
USP49-201ENST00000373006 IFNA7P01567 189 aa12.78□□□□□ -0.36
USP49-201ENST00000373006 HPXP02790 462 aa12.78□□□□□ -0.36
USP49-201ENST00000373006 NPR2P20594 1047 aa12.78□□□□□ -0.36
USP49-201ENST00000373006 RBMS1P29558 406 aaKnown RBP12.78□□□□□ -0.36
USP49-201ENST00000373006 FRKP42685 505 aaPredicted RBP12.78□□□□□ -0.36
USP49-201ENST00000373006 PGGHGQ32M88 737 aa12.78□□□□□ -0.36
USP49-201ENST00000373006 UBE3DQ7Z6J8 389 aa12.78□□□□□ -0.36
USP49-201ENST00000373006 IZUMO1Q8IYV9 350 aa12.78□□□□□ -0.36
USP49-201ENST00000373006 OR13C5Q8NGS8 318 aa12.78□□□□□ -0.36
USP49-201ENST00000373006 OR5W2Q8NH69 310 aa12.78□□□□□ -0.36
USP49-201ENST00000373006 PIGKQ92643 395 aa12.78□□□□□ -0.36
USP49-201ENST00000373006 OSTF1Q92882 214 aa12.78□□□□□ -0.36
USP49-201ENST00000373006 LINC00052Q96N35 136 aa12.78□□□□□ -0.36
USP49-201ENST00000373006 TIMP4Q99727 224 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms