RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 U3KQ87 197 aa15.29■□□□□ 0.04
SDC4-201ENST00000372733 CLEC3AO75596 197 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 PAICSP22234 425 aaKnown RBP15.28■□□□□ 0.04
SDC4-201ENST00000372733 ACSL1P33121 698 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 BCL6P41182 706 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 CLCNKAP51800 687 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 PDX1P52945 283 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 AP2S1P53680 142 aaPredicted RBP15.28■□□□□ 0.04
SDC4-201ENST00000372733 DPTQ07507 201 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 SLC25A35Q3KQZ1 300 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 LYPD4Q6UWN0 246 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 MBOAT2Q6ZWT7 520 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 ZNF680Q8NEM1 530 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 NUP43Q8NFH3 380 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 OR10H4Q8NGA5 316 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 KAT2AQ92830 837 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 LGR4Q9BXB1 951 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 PCBD2Q9H0N5 130 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 KLHL1Q9NR64 748 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 SLC9B1P1A6NJY1 282 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 FGF18O76093 207 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 NFATC1O95644 943 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 PCCBP05166 539 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 CD3GP09693 182 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 ZGLP1P0C6A0 271 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 ANXA3P12429 323 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 GALP22466 123 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 CERS1P27544 350 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 RFX3P48380 749 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 E2F1Q01094 437 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 SLC3A1Q07837 685 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 RPA4Q13156 261 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 OR6C4Q8NGE1 309 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 MS4A3Q96HJ5 214 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 JAM3Q9BX67 310 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 EMC7Q9NPA0 242 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 GLTPQ9NZD2 209 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 PRKAG2Q9UGJ0 569 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 SLC7A7Q9UM01 511 aa15.28■□□□□ 0.04
SDC4-201ENST00000372733 A0A0G2JK05 382 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 SHOXO15266 292 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 REM1O75628 298 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 RPN2P04844 631 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 MRPL3P09001 348 aaKnown RBP15.27■□□□□ 0.04
SDC4-201ENST00000372733 NPR2P20594 1047 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 ENPP1P22413 925 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 RNF144AP50876 292 aaPredicted RBP15.27■□□□□ 0.04
SDC4-201ENST00000372733 PRR5P85299 388 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 KLHL12Q53G59 568 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 CDC73Q6P1J9 531 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 CNKSR3Q6P9H4 555 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 ACOT4Q8N9L9 421 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 ENKD1Q9H0I2 346 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 OR51J1Q9H342 316 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 DPAGT1Q9H3H5 408 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 ANKRD19PQ9H560 264 aa15.27■□□□□ 0.04
SDC4-201ENST00000372733 C6orf106Q9H6K1 298 aaPredicted RBP15.27■□□□□ 0.04
SDC4-201ENST00000372733 EIF3KQ9UBQ5 218 aaKnown RBP15.27■□□□□ 0.04
SDC4-201ENST00000372733 TEX13CA0A0J9YWL9 993 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 EMC8O43402 210 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 SOX30O94993 753 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 CXCL14O95715 111 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 RAF1P04049 648 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 CISD3P0C7P0 127 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 HIST1H1TP22492 207 aaPredicted RBP15.27■□□□□ 0.03
SDC4-201ENST00000372733 HOXD10P28358 340 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 BDH1Q02338 343 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 SLC36A2Q495M3 483 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 FNDC3BQ53EP0 1204 aaKnown RBP15.27■□□□□ 0.03
SDC4-201ENST00000372733 PRAMEF8Q5VWM4 474 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 PRAMEF7Q5VXH5 474 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 LRRTM4Q86VH4 590 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 C17orf47Q8NEP4 570 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 OR5W2Q8NH69 310 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 PXYLP1Q8TE99 480 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 SMAP2Q8WU79 429 aaPredicted RBP15.27■□□□□ 0.03
SDC4-201ENST00000372733 ING5Q8WYH8 240 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 NR4A3Q92570 626 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 DPH1Q9BZG8 443 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 HEXA-AS1Q9H8Q6 139 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 TRIM36Q9NQ86 728 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 UCKL1Q9NWZ5 548 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 KLHL28Q9NXS3 571 aa15.27■□□□□ 0.03
SDC4-201ENST00000372733 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.27■□□□□ 0.03
SDC4-201ENST00000372733 A0A0B4J203 849 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 DAPL1A0PJW8 107 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 PRRT4C9JH25 899 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 LATO43561 262 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 HMGN1P05114 100 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 SLC35G4P0C7Q5 338 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 GIFP27352 417 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 CCR6P51684 374 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 POU4F3Q15319 338 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 DHCR24Q15392 516 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 METRNLQ641Q3 311 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 RPTNQ6XPR3 784 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 CEACAM19Q7Z692 300 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 GANCQ8TET4 914 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 MS4A6EQ96DS6 147 aa15.26■□□□□ 0.03
SDC4-201ENST00000372733 CCDC120Q96HB5 630 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms