RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 GAL3ST4Q96RP7 486 aa13.76□□□□□ -0.21
RPF1-202ENST00000370656 PRPF18Q99633 342 aaKnown RBP13.76□□□□□ -0.21
RPF1-202ENST00000370656 EBPLQ9BY08 206 aa13.76□□□□□ -0.21
RPF1-202ENST00000370656 PRDM14Q9GZV8 571 aa13.76□□□□□ -0.21
RPF1-202ENST00000370656 SPAG4Q9NPE6 437 aa13.76□□□□□ -0.21
RPF1-202ENST00000370656 TAS2R7Q9NYW3 318 aa13.76□□□□□ -0.21
RPF1-202ENST00000370656 BTNL2Q9UIR0 455 aa13.76□□□□□ -0.21
RPF1-202ENST00000370656 NUP214P35658 2090 aaPredicted RBP13.75□□□□□ -0.21
RPF1-202ENST00000370656 KIAA1549Q9HCM3 1950 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 A0A096LPI6 279 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 PRSS51A0A1B0GVH4 220 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 GNG14A0A1W2PPG7 69 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 ANKRD33BA6NCL7 494 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 CD8B2A6NJW9 211 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 KIAA1324LA8MWY0 1029 aaPredicted RBP13.75□□□□□ -0.21
RPF1-202ENST00000370656 CASKO14936 926 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 IL18BPO95998 194 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 IGKV3-11P04433 115 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 HSD17B1P14061 328 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 HIST1H1TP22492 207 aaPredicted RBP13.75□□□□□ -0.21
RPF1-202ENST00000370656 ATP5A1P25705 553 aaKnown RBP13.75□□□□□ -0.21
RPF1-202ENST00000370656 HPCAL1P37235 193 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 ACTR3P61158 418 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 IGLV3-21P80748 117 aaPredicted RBP13.75□□□□□ -0.21
RPF1-202ENST00000370656 NFYCQ13952 458 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 SAMD4BQ5PRF9 694 aaKnown RBP13.75□□□□□ -0.21
RPF1-202ENST00000370656 CCNYL2Q5T2Q4 361 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 SLC2A7Q6PXP3 512 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 LYPD8Q6UX82 237 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 GPR180Q86V85 440 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 NUDT13Q86X67 352 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 TAGAPQ8N103 731 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 SMPDL3BQ92485 455 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 DIO2Q92813 273 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 ITCHQ96J02 903 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 CCDC115Q96NT0 180 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 DACH2Q96NX9 599 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 TRIB1Q96RU8 372 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 CGREF1Q99674 301 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 PELOQ9BRX2 385 aaKnown RBP13.75□□□□□ -0.21
RPF1-202ENST00000370656 BHLHE41Q9C0J9 482 aaPredicted RBP13.75□□□□□ -0.21
RPF1-202ENST00000370656 PAIP1Q9H074 479 aaKnown RBP13.75□□□□□ -0.21
RPF1-202ENST00000370656 RMND5AQ9H871 391 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 PROK2Q9HC23 129 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 MS4A12Q9NXJ0 267 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 SLAMF8Q9P0V8 285 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 AP3M1Q9Y2T2 418 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 HIVEP2P31629 2446 aa13.75□□□□□ -0.21
RPF1-202ENST00000370656 MBD3L4A6NDZ8 208 aaPredicted RBP13.74□□□□□ -0.21
RPF1-202ENST00000370656 MBD3L3A6NE82 208 aaPredicted RBP13.74□□□□□ -0.21
RPF1-202ENST00000370656 MBD3L5A6NJ08 208 aaPredicted RBP13.74□□□□□ -0.21
RPF1-202ENST00000370656 SAP18O00422 153 aaKnown RBP13.74□□□□□ -0.21
RPF1-202ENST00000370656 FGF17O60258 216 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 SH3BGRLO75368 114 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 TRIM3O75382 744 aaPredicted RBP13.74□□□□□ -0.21
RPF1-202ENST00000370656 SNX4O95219 450 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 KCNH1O95259 989 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 LY6G6DO95868 133 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 HRGP04196 525 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 ZCCHC18P0CG32 403 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 ME2P23368 584 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 TLX1P31314 330 aaPredicted RBP13.74□□□□□ -0.21
RPF1-202ENST00000370656 SSR2P43308 183 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 MASP1P48740 699 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 EEFSECP57772 596 aaKnown RBP13.74□□□□□ -0.21
RPF1-202ENST00000370656 TRAP1Q12931 704 aaKnown RBP13.74□□□□□ -0.21
RPF1-202ENST00000370656 POU4F3Q15319 338 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 TOMM20Q15388 145 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 NTRK2Q16620 822 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 RUNDC3AQ59EK9 446 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 CPTPQ5TA50 214 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 ANXA8L1Q5VT79 327 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 VASNQ6EMK4 673 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 NANOGP8Q6NSW7 305 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 ZNF793Q6ZN11 406 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 RNF111Q6ZNA4 994 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 DHDDSQ86SQ9 333 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 PACS2Q86VP3 889 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 PRIMA1Q86XR5 153 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 KRTAP1-3Q8IUG1 177 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 OR7A2PQ8NGA2 310 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 OR8J3Q8NGG0 315 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 MBD3L2Q8NHZ7 208 aaPredicted RBP13.74□□□□□ -0.21
RPF1-202ENST00000370656 TANKQ92844 425 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 RPF2Q9H7B2 306 aaKnown RBP13.74□□□□□ -0.21
RPF1-202ENST00000370656 NANOGQ9H9S0 305 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 CALHM2Q9HA72 323 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 CMTM6Q9NX76 183 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 EHD3Q9NZN3 535 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 JKAMPQ9P055 326 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 CNOT11Q9UKZ1 510 aaKnown RBP13.74□□□□□ -0.21
RPF1-202ENST00000370656 POMPQ9Y244 141 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 ASB4Q9Y574 426 aa13.74□□□□□ -0.21
RPF1-202ENST00000370656 OR6C76A6NM76 312 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 KDM4EB2RXH2 506 aaPredicted RBP13.73□□□□□ -0.21
RPF1-202ENST00000370656 RTCAO00442 366 aaKnown RBP13.73□□□□□ -0.21
RPF1-202ENST00000370656 RNASET2O00584 256 aaKnown RBP13.73□□□□□ -0.21
RPF1-202ENST00000370656 NME4O00746 187 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 ACOT8O14734 319 aa13.73□□□□□ -0.21
RPF1-202ENST00000370656 AKAP10O43572 662 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms