RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 MVDP53602 400 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 ATP12AP54707 1039 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 KCNC4Q03721 635 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 C17orf67Q0P5P2 114 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 GANABQ14697 944 aaKnown RBP13.51□□□□□ -0.25
COL9A1-204ENST00000370496 SYPL1Q16563 259 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 ZNF630Q2M218 657 aaPredicted RBP13.51□□□□□ -0.25
COL9A1-204ENST00000370496 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.51□□□□□ -0.25
COL9A1-204ENST00000370496 TRMT5Q32P41 509 aaKnown RBP13.51□□□□□ -0.25
COL9A1-204ENST00000370496 PDZK1Q5T2W1 519 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 REP15Q6BDI9 236 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 FRRS1Q6ZNA5 592 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 MTDHQ86UE4 582 aaKnown RBP13.51□□□□□ -0.25
COL9A1-204ENST00000370496 RETREG3Q86VR2 466 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 ZNF619Q8N2I2 560 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 DPP10Q8N608 796 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 TMCO5AQ8N6Q1 288 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 ANKFN1Q8N957 763 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 FAM83FQ8NEG4 500 aaPredicted RBP13.51□□□□□ -0.25
COL9A1-204ENST00000370496 OR2M3Q8NG83 312 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 PHOSPHO1Q8TCT1 267 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 DUSP19Q8WTR2 217 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 SH3YL1Q96HL8 342 aaPredicted RBP13.51□□□□□ -0.25
COL9A1-204ENST00000370496 TRNT1Q96Q11 434 aaKnown RBP13.51□□□□□ -0.25
COL9A1-204ENST00000370496 RTN4RQ9BZR6 473 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 DSN1Q9H410 356 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 PTGES2Q9H7Z7 377 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 ACKR4Q9NPB9 350 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 FAM53CQ9NYF3 392 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 MED11Q9P086 117 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 UBR5O95071 2799 aaPredicted RBP13.51□□□□□ -0.25
COL9A1-204ENST00000370496 ESPL1Q14674 2120 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 TRBV5-3A0A0A0MS03 114 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 TRGV8A0A0C4DH27 118 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 FAM47E-STBD1D6RA91 191 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 AQP7O14520 342 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 PRRG2O14669 202 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 ADAM10O14672 748 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 HCRTR2O43614 444 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 SUSD5O60279 629 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 DPP4P27487 766 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 SRD5A2P31213 254 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 CYLC2Q14093 348 aaPredicted RBP13.5□□□□□ -0.25
COL9A1-204ENST00000370496 GNA13Q14344 377 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 RGNQ15493 299 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 CD226Q15762 336 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 EIPR1Q53HC9 387 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 COQ5Q5HYK3 327 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 WIPI1Q5MNZ9 446 aaPredicted RBP13.5□□□□□ -0.25
COL9A1-204ENST00000370496 GCNT6Q5T4J0 391 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 C1QL3Q5VWW1 255 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 TYW3Q6IPR3 259 aaKnown RBP13.5□□□□□ -0.25
COL9A1-204ENST00000370496 YRDCQ86U90 279 aaKnown RBP13.5□□□□□ -0.25
COL9A1-204ENST00000370496 CD163Q86VB7 1156 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 IFNEQ86WN2 208 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 FADS6Q8N9I5 356 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 NEIL3Q8TAT5 605 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 CPPED1Q9BRF8 314 aaPredicted RBP13.5□□□□□ -0.25
COL9A1-204ENST00000370496 OR2B2Q9GZK3 357 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 CACYBPQ9HB71 228 aaKnown RBP13.5□□□□□ -0.25
COL9A1-204ENST00000370496 TAS2R10Q9NYW0 307 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 CALML5Q9NZT1 146 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 DTNAQ9Y4J8 743 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 RELNP78509 3460 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 MYO18BQ8IUG5 2567 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 ZNF407Q9C0G0 2248 aa13.5□□□□□ -0.25
COL9A1-204ENST00000370496 IGLV3-32A0A0A0MS00 114 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 LOC100653049A0A140TA62 436 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 PRAMEF27A3QJZ7 478 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 OR14I1A6ND48 311 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 C5orf58C9J3I9 102 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 NPIPA2E9PIF3 369 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 NPIPB9F8W1W9 429 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 NPIPA3F8WFD2 350 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 FBP2O00757 339 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 KRT34O76011 436 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 ZIC2O95409 532 aaPredicted RBP13.49□□□□□ -0.25
COL9A1-204ENST00000370496 CHRM4P08173 479 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 UBL4AP11441 157 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 CCR4P51679 360 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 CRISP3P54108 245 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 DSCR4P56555 118 aaPredicted RBP13.49□□□□□ -0.25
COL9A1-204ENST00000370496 MTPNP58546 118 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 CAPRIN1Q14444 709 aaKnown RBP13.49□□□□□ -0.25
COL9A1-204ENST00000370496 RAET1LQ5VY80 246 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 DLEU7Q6UYE1 221 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 LRRC74BQ6ZQY2 392 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 FGD2Q7Z6J4 655 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 MTERF4Q7Z6M4 381 aaKnown RBP13.49□□□□□ -0.25
COL9A1-204ENST00000370496 HMGN2P46Q86SG4 172 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 POU5F2Q8N7G0 328 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 PCYOX1LQ8NBM8 494 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 FAM57AQ8TBR7 257 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 OIT3Q8WWZ8 545 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 SARAFQ96BY9 339 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 CGREF1Q99674 301 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 IKZF5Q9H5V7 419 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 SPRR3Q9UBC9 169 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 TNFRSF10DQ9UBN6 386 aa13.49□□□□□ -0.25
COL9A1-204ENST00000370496 TINAGQ9UJW2 476 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms