RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 MAT1AQ00266 395 aaKnown RBP16.79■□□□□ 0.28
CHTOP-201ENST00000368686 SYTL3Q4VX76 610 aa16.79■□□□□ 0.28
CHTOP-201ENST00000368686 LRRN1Q6UXK5 716 aa16.79■□□□□ 0.28
CHTOP-201ENST00000368686 PGAP1Q75T13 922 aa16.79■□□□□ 0.28
CHTOP-201ENST00000368686 CXXC5Q7LFL8 322 aaKnown RBP16.79■□□□□ 0.28
CHTOP-201ENST00000368686 THOC6Q86W42 341 aaKnown RBP16.79■□□□□ 0.28
CHTOP-201ENST00000368686 SVBPQ8N300 66 aa16.79■□□□□ 0.28
CHTOP-201ENST00000368686 LILRB2Q8N423 598 aa16.79■□□□□ 0.28
CHTOP-201ENST00000368686 FBXO22Q8NEZ5 403 aa16.79■□□□□ 0.28
CHTOP-201ENST00000368686 CLP1Q92989 425 aaKnown RBP16.79■□□□□ 0.28
CHTOP-201ENST00000368686 RSPO3Q9BXY4 272 aaPredicted RBP16.79■□□□□ 0.28
CHTOP-201ENST00000368686 PLEKHA1Q9HB21 404 aa16.79■□□□□ 0.28
CHTOP-201ENST00000368686 GSN-AS1Q9NRJ2 163 aa16.79■□□□□ 0.28
CHTOP-201ENST00000368686 NFKBIL1Q9UBC1 381 aaPredicted RBP16.79■□□□□ 0.28
CHTOP-201ENST00000368686 RCE1Q9Y256 329 aa16.79■□□□□ 0.28
CHTOP-201ENST00000368686 FXYD6-FXYD2A0A087WZ82 144 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 DISC1C4P0D8 188 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 H3BNC9 293 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 EIF3GO75821 320 aaKnown RBP eCLIP16.78■□□□□ 0.28
CHTOP-201ENST00000368686 APBA3O96018 575 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 HTR1FP30939 366 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 SPAM1P38567 509 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 ARHGDIBP52566 201 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 KRT33BQ14525 404 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 DUSP28Q4G0W2 176 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 CD300LGQ6UXG3 332 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 TCEAL3Q969E4 200 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 FBXO32Q969P5 355 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 ZNF607Q96SK3 696 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 TSNAXQ99598 290 aaKnown RBP16.78■□□□□ 0.28
CHTOP-201ENST00000368686 KATNBL1Q9H079 304 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 FXYD6Q9H0Q3 95 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 AUNIPQ9H7T9 357 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 KLHL1Q9NR64 748 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 OPN4Q9UHM6 478 aa16.78■□□□□ 0.28
CHTOP-201ENST00000368686 SPDEFO95238 335 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 ACAA1P09110 424 aaPredicted RBP16.77■□□□□ 0.28
CHTOP-201ENST00000368686 CAPZA2P47755 286 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 DLX5P56178 289 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 GMFBP60983 142 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 MC1RQ01726 317 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 SERTAD2Q14140 314 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 KCNA10Q16322 511 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 PRAMEF13Q5VWM6 474 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 UQCC3Q6UW78 93 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 KRT78Q8N1N4 520 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 HDDC3Q8N4P3 179 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 GLYATL2Q8WU03 294 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 TEX12Q9BXU0 123 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 ISG20L2Q9H9L3 353 aaKnown RBP16.77■□□□□ 0.28
CHTOP-201ENST00000368686 NOX3Q9HBY0 568 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 TRIM36Q9NQ86 728 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 CTPS2Q9NRF8 586 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 MAN2C1Q9NTJ4 1040 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 MYEF2Q9P2K5 600 aaKnown RBP16.77■□□□□ 0.28
CHTOP-201ENST00000368686 DTX4Q9Y2E6 619 aa16.77■□□□□ 0.28
CHTOP-201ENST00000368686 SIRT4Q9Y6E7 314 aaPredicted RBP16.77■□□□□ 0.28
CHTOP-201ENST00000368686 ADAM12O43184 909 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 S100A8P05109 93 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 UBBP0CG47 229 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 UBCP0CG48 685 aaKnown RBP16.77■□□□□ 0.27
CHTOP-201ENST00000368686 DPEP1P16444 411 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 TYRP1P17643 537 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 ITGB8P26012 769 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 RPS13P62277 151 aaKnown RBP16.77■□□□□ 0.27
CHTOP-201ENST00000368686 RPS27AP62979 156 aaKnown RBP16.77■□□□□ 0.27
CHTOP-201ENST00000368686 UBA52P62987 128 aaKnown RBP16.77■□□□□ 0.27
CHTOP-201ENST00000368686 FAM27D1Q5T7N8 215 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 NHLRC1Q6VVB1 395 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 DMBX1Q8NFW5 382 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 THEM6Q8WUY1 208 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 ECHDC3Q96DC8 303 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 WFDC6Q9BQY6 131 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 UTP23Q9BRU9 249 aaKnown RBP16.77■□□□□ 0.27
CHTOP-201ENST00000368686 BARX1Q9HBU1 254 aaPredicted RBP16.77■□□□□ 0.27
CHTOP-201ENST00000368686 MYNNQ9NPC7 610 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 ZDHHC3Q9NYG2 299 aa16.77■□□□□ 0.27
CHTOP-201ENST00000368686 A0A0G2JLL6 359 aaPredicted RBP16.76■□□□□ 0.27
CHTOP-201ENST00000368686 NEDD8-MDP1E9PL57 170 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 SULT1C2O00338 296 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 CLDN11O75508 207 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 F2P00734 622 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 S100A9P06702 114 aaKnown RBP16.76■□□□□ 0.27
CHTOP-201ENST00000368686 MAPK14Q16539 360 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 ZNF792Q3KQV3 632 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 TMEM255AQ5JRV8 349 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 TNFAIP8L2Q6P589 184 aaPredicted RBP16.76■□□□□ 0.27
CHTOP-201ENST00000368686 TMEM88Q6PEY1 159 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 LINGO4Q6UY18 593 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 PRSS45Q7RTY3 260 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 CEACAM19Q7Z692 300 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 PRRT2Q7Z6L0 340 aaPredicted RBP16.76■□□□□ 0.27
CHTOP-201ENST00000368686 MED17Q9NVC6 651 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 RASL12Q9NYN1 266 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 LHX3Q9UBR4 397 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 BRWD3Q6RI45 1802 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 EIF1BO60739 113 aaKnown RBP16.76■□□□□ 0.27
CHTOP-201ENST00000368686 MPGP29372 298 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 IFNGR2P38484 337 aa16.76■□□□□ 0.27
CHTOP-201ENST00000368686 EIF1P41567 113 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms