RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 KIF2AO00139 706 aaPredicted RBP14.36□□□□□ -0.11
CKS1B-202ENST00000368436 EIF1AYO14602 144 aaKnown RBP14.36□□□□□ -0.11
CKS1B-202ENST00000368436 RGS14O43566 566 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 NDUFB5O43674 189 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 GMFGO60234 142 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 SS18L1O75177 396 aaPredicted RBP14.36□□□□□ -0.11
CKS1B-202ENST00000368436 OXSR1O95747 527 aaPredicted RBP14.36□□□□□ -0.11
CKS1B-202ENST00000368436 ACP2P11117 423 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 SDC1P18827 310 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 GPC1P35052 558 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 PDE7AQ13946 482 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 CTU2Q2VPK5 515 aaKnown RBP14.36□□□□□ -0.11
CKS1B-202ENST00000368436 ZNF385BQ569K4 471 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 LIPMQ5VYY2 423 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 WDR75Q8IWA0 830 aaKnown RBP14.36□□□□□ -0.11
CKS1B-202ENST00000368436 GTPBP8Q8N3Z3 284 aaPredicted RBP14.36□□□□□ -0.11
CKS1B-202ENST00000368436 NUP43Q8NFH3 380 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 OR6K3Q8NGY3 331 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 OR2T11Q8NH01 316 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 ZFP28Q8NHY6 868 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 ACTRT2Q8TDY3 377 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 ZBED6CLQ96FA7 236 aaPredicted RBP14.36□□□□□ -0.11
CKS1B-202ENST00000368436 ZC3HAV1LQ96H79 300 aaKnown RBP14.36□□□□□ -0.11
CKS1B-202ENST00000368436 GMPPAQ96IJ6 420 aaPredicted RBP14.36□□□□□ -0.11
CKS1B-202ENST00000368436 COX4I2Q96KJ9 171 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 CCL19Q99731 98 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 NPAS1Q99742 590 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 CCT7Q99832 543 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 IQCGQ9H095 443 aaKnown RBP14.36□□□□□ -0.11
CKS1B-202ENST00000368436 ZNF395Q9H8N7 513 aaPredicted RBP14.36□□□□□ -0.11
CKS1B-202ENST00000368436 PAQR5Q9NXK6 330 aaPredicted RBP14.36□□□□□ -0.11
CKS1B-202ENST00000368436 ABCA2Q9BZC7 2435 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 AZIN1O14977 448 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 ADAMDEC1O15204 470 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 KCNK2O95069 426 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 SHBGP04278 402 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 THBDP07204 575 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 PPP3CBP16298 524 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 LCN1P31025 176 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 EIF1AXP47813 144 aaKnown RBP14.35□□□□□ -0.11
CKS1B-202ENST00000368436 PRKAG1P54619 331 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 MANFP55145 182 aaKnown RBP14.35□□□□□ -0.11
CKS1B-202ENST00000368436 RAC1P63000 192 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 SLC18A2Q05940 514 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 DUSP5Q16690 384 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 RFTN2Q52LD8 501 aaPredicted RBP14.35□□□□□ -0.11
CKS1B-202ENST00000368436 EXOSC6Q5RKV6 272 aaKnown RBP14.35□□□□□ -0.11
CKS1B-202ENST00000368436 ANKRD34AQ69YU3 496 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 ZCCHC12Q6PEW1 402 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 TDRPQ86YL5 185 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 CIARTQ8N365 385 aaPredicted RBP14.35□□□□□ -0.11
CKS1B-202ENST00000368436 SLC16A11Q8NCK7 471 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 OR6Y1Q8NGX8 325 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 OR10D3Q8NH80 312 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 KIF18AQ8NI77 898 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 PPP1R14CQ8TAE6 165 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 IGFBPL1Q8WX77 278 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 SLC9A6Q92581 669 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 ZBTB8AQ96BR9 441 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 PPCDCQ96CD2 204 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 MS4A4EQ96PG1 132 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 RHOXF2Q9BQY4 288 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 PRRG4Q9BZD6 226 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 KLHL4Q9C0H6 718 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 C12orf65Q9H3J6 166 aaKnown RBP14.35□□□□□ -0.11
CKS1B-202ENST00000368436 TUBB1Q9H4B7 451 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 ACSS1Q9NUB1 689 aaPredicted RBP14.35□□□□□ -0.11
CKS1B-202ENST00000368436 EMC9Q9Y3B6 208 aa14.35□□□□□ -0.11
CKS1B-202ENST00000368436 A0A1W2PRB8 838 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 KLF4O43474 513 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 AKAP10O43572 662 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 LY6G6DO95868 133 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 EXOC3L2Q2M3D2 409 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 PLPPR5Q32ZL2 321 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 CPTPQ5TA50 214 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 MFSD12Q6NUT3 480 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 FIGNL1Q6PIW4 674 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 STAC2Q6ZMT1 411 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 YTHDF3Q7Z739 585 aaKnown RBP14.34□□□□□ -0.11
CKS1B-202ENST00000368436 ZAR1Q86SH2 424 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 GALNT10Q86SR1 603 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 CCDC63Q8NA47 563 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 MTERF3Q96E29 417 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 C16orf58Q96GQ5 468 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 TSSK3Q96PN8 268 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 BDH2Q9BUT1 245 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 GSX2Q9BZM3 304 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 PPCSQ9HAB8 311 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 UBQLN4Q9NRR5 601 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 GLRX2Q9NS18 164 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 MED17Q9NVC6 651 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 FBXO34Q9NWN3 711 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 SH3BP4Q9P0V3 963 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 BAIAP2L1Q9UHR4 511 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 CLEC4AQ9UMR7 237 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 TMED5Q9Y3A6 229 aa14.34□□□□□ -0.11
CKS1B-202ENST00000368436 A0A1W2PQD3 144 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 H7C1Q1 480 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 COPEO14579 308 aa14.33□□□□□ -0.12
CKS1B-202ENST00000368436 LSM1O15116 133 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms