RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 EXOSC6Q5RKV6 272 aaKnown RBP13.31□□□□□ -0.28
CD48-201ENST00000368045 VASNQ6EMK4 673 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 NIPAL3Q6P499 406 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 NOXA1Q86UR1 476 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 LIX1LQ8IVB5 337 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 TCTE3Q8IZS6 198 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 KCT2Q8NC54 265 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 BBS1Q8NFJ9 593 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 LILRB4Q8NHJ6 448 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 ARMC5Q96C12 935 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 RNF170Q96K19 258 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 HS6ST2Q96MM7 605 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 UBL7Q96S82 380 aaPredicted RBP13.31□□□□□ -0.28
CD48-201ENST00000368045 SDF2Q99470 211 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 TMEM43Q9BTV4 400 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 TRAF4Q9BUZ4 470 aaPredicted RBP13.31□□□□□ -0.28
CD48-201ENST00000368045 HDHD5Q9BXW7 423 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 TWSG1Q9GZX9 223 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 RNF32Q9H0A6 362 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 SLA2Q9H6Q3 261 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 FBRSQ9HAH7 460 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 BABAM2Q9NXR7 383 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 C19orf53Q9UNZ5 99 aaPredicted RBP13.31□□□□□ -0.28
CD48-201ENST00000368045 CSNK1G3Q9Y6M4 447 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 A0A087WV62 115 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 PRSS38A1L453 326 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 FAM25AB3EWG3 89 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 FAM25CB3EWG5 89 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 FAM25GB3EWG6 89 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 GTPBP1O00178 669 aaKnown RBP13.3□□□□□ -0.28
CD48-201ENST00000368045 SOCS6O14544 535 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 CDC42EP2O14613 210 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 LRRTM2O43300 516 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 TNFSF14O43557 240 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 RNF13O43567 381 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 B3GALT2O43825 422 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 RCBTB2O95199 551 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 NTN1O95631 604 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 AK1P00568 194 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 TNFRSF4P43489 277 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 CAV3P56539 151 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 ADAM15Q13444 863 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 DUSP5Q16690 384 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 ZCCHC12Q6PEW1 402 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 SMARCD3Q6STE5 483 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 TMEM91Q6ZNR0 172 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 KLBQ86Z14 1044 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 ZNF619Q8N2I2 560 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 LNX2Q8N448 690 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 OR4E2Q8NGC2 313 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 OR14C36Q8NHC7 312 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 FANK1Q8TC84 345 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 CD180Q99467 661 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 KCNJ15Q99712 375 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 PRSS27Q9BQR3 290 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 OR52D1Q9H346 318 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 FGF22Q9HCT0 170 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 LYRM4Q9HD34 91 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 DZANK1Q9NVP4 752 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 SIDT1Q9NXL6 827 aaKnown RBP13.3□□□□□ -0.28
CD48-201ENST00000368045 PCOLCE2Q9UKZ9 415 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 NUMA1Q14980 2115 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 SMIM30A4D0T7 59 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 TTC36A6NLP5 189 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 BHLHE40O14503 412 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 LYRM1O43325 122 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 SCO2O43819 266 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 STX11O75558 287 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 SLC2A10O95528 541 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 ZGLP1P0C6A0 271 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 FAM157BP0CG42 384 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 CPMP14384 443 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 NID1P14543 1247 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 F8A1P23610 371 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 SSTR4P31391 388 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 TAS2R43P59537 309 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 GPM6BQ13491 265 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 IL18Q14116 193 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 FHL5Q5TD97 284 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 CDK20Q8IZL9 346 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 SIRT6Q8N6T7 355 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 DMRTB1Q96MA1 342 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 FCRL4Q96PJ5 515 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 DCLRE1CQ96SD1 692 aaKnown RBP13.3□□□□□ -0.28
CD48-201ENST00000368045 MTIF3Q9H2K0 278 aaKnown RBP13.3□□□□□ -0.28
CD48-201ENST00000368045 SRMSQ9H3Y6 488 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 C6orf106Q9H6K1 298 aaPredicted RBP13.3□□□□□ -0.28
CD48-201ENST00000368045 TRIM36Q9NQ86 728 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 POLE3Q9NRF9 147 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 DUSP22Q9NRW4 184 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 C14orf105Q9NVL8 296 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 TBC1D29Q9UFV1 150 aa13.3□□□□□ -0.28
CD48-201ENST00000368045 NUFIP1Q9UHK0 495 aaKnown RBP13.3□□□□□ -0.28
CD48-201ENST00000368045 A0A0B4J293 547 aa13.29□□□□□ -0.28
CD48-201ENST00000368045 FAM86C2PA6NEL3 165 aa13.29□□□□□ -0.28
CD48-201ENST00000368045 PRR23AA6NEV1 266 aa13.29□□□□□ -0.28
CD48-201ENST00000368045 SLC22A31A6NKX4 558 aa13.29□□□□□ -0.28
CD48-201ENST00000368045 C12orf71A8MTZ7 269 aa13.29□□□□□ -0.28
CD48-201ENST00000368045 A8MV72 311 aaPredicted RBP13.29□□□□□ -0.28
CD48-201ENST00000368045 BTN3A3O00478 584 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms