RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TRIM45Q9H8W5 580 aaPredicted RBP11.19□□□□□ -0.62
USF1-203ENST00000368021 PNO1Q9NRX1 252 aaKnown RBP11.19□□□□□ -0.62
USF1-203ENST00000368021 IFT80Q9P2H3 777 aaPredicted RBP11.19□□□□□ -0.62
USF1-203ENST00000368021 CFL2Q9Y281 166 aa11.19□□□□□ -0.62
USF1-203ENST00000368021 CLCA3PQ9Y6N3 262 aa11.19□□□□□ -0.62
USF1-203ENST00000368021 ENPP4Q9Y6X5 453 aa11.19□□□□□ -0.62
USF1-203ENST00000368021 TRIM64BA6NI03 449 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 EI24O14681 340 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 BRINP1O60477 761 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 FCMRO60667 390 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 LGI1O95970 557 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 HPRP00739 348 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 CLPSP04118 112 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 IGKV3-11P04433 115 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 ALPPP05187 535 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 RHCEP18577 417 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 FPR1P21462 350 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 AGXTP21549 392 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 PRKAR1BP31321 381 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 DNAJA1P31689 397 aaKnown RBP11.18□□□□□ -0.62
USF1-203ENST00000368021 GABRA3P34903 492 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 OR1E2P47887 323 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 ALDH3A2P51648 485 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 ARHGDIAP52565 204 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 SLC51BQ86UW2 128 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 SPARTQ8N0X7 666 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 GRPEL2Q8TAA5 225 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 LIN37Q96GY3 246 aaPredicted RBP11.18□□□□□ -0.62
USF1-203ENST00000368021 CEP19Q96LK0 163 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 EPYCQ99645 322 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 ZPBPQ9BS86 351 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 AMBRA1Q9C0C7 1298 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 REEP1Q9H902 201 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 WDR54Q9H977 334 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 SLC9A8Q9Y2E8 581 aa11.18□□□□□ -0.62
USF1-203ENST00000368021 ANKRD11Q6UB99 2663 aaPredicted RBP11.18□□□□□ -0.62
USF1-203ENST00000368021 C7orf72A4D263 438 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 PLD2O14939 933 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 KIAA0513O60268 411 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 DIRAS1O95057 198 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 TNFSF15O95150 251 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 DDAH2O95865 285 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 ALPLP05186 524 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 THBS1P07996 1170 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 JMJD7P0C870 316 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 TNFRSF1BP20333 461 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 RPS4Y1P22090 263 aaKnown RBP11.17□□□□□ -0.62
USF1-203ENST00000368021 TRHRP34981 398 aaPredicted RBP11.17□□□□□ -0.62
USF1-203ENST00000368021 IST1P53990 364 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 SLC37A1P57057 533 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 C19orf57Q0VDD7 668 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 ZNF846Q147U1 533 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 KCNJ8Q15842 424 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 ZNF311Q5JNZ3 666 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 MRPL14Q6P1L8 145 aaKnown RBP11.17□□□□□ -0.62
USF1-203ENST00000368021 ZNF517Q6ZMY9 492 aaPredicted RBP11.17□□□□□ -0.62
USF1-203ENST00000368021 OLIG3Q7RTU3 272 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 ZNF605Q86T29 641 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 STK32CQ86UX6 486 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 ZNF619Q8N2I2 560 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 SLC2A12Q8TD20 617 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 PIK3R3Q92569 461 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 RNF31Q96EP0 1072 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 RDH12Q96NR8 316 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 SLC46A1Q96NT5 459 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 DHRS9Q9BPW9 319 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 RBM4BQ9BQ04 359 aaKnown RBP11.17□□□□□ -0.62
USF1-203ENST00000368021 RBM4Q9BWF3 364 aaKnown RBP11.17□□□□□ -0.62
USF1-203ENST00000368021 NRSN2Q9GZP1 204 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 GABARAPL1Q9H0R8 117 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 CCDC86Q9H6F5 360 aaKnown RBP11.17□□□□□ -0.62
USF1-203ENST00000368021 POLR1BQ9H9Y6 1135 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 CACYBPQ9HB71 228 aaKnown RBP11.17□□□□□ -0.62
USF1-203ENST00000368021 Q9N2J8 555 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 WDR70Q9NW82 654 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 SLC39A1Q9NY26 324 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 USE1Q9NZ43 259 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 PISDQ9UG56 409 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 NXT1Q9UKK6 140 aaKnown RBP11.17□□□□□ -0.62
USF1-203ENST00000368021 MKLN1Q9UL63 735 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 SAMHD1Q9Y3Z3 626 aaKnown RBP11.17□□□□□ -0.62
USF1-203ENST00000368021 LOXL2Q9Y4K0 774 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 AP4B1Q9Y6B7 739 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 EPG5Q9HCE0 2579 aa11.17□□□□□ -0.62
USF1-203ENST00000368021 CCDC187A0A096LP49 1063 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 AGAP5A6NIR3 686 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 IDSB3KWA1 339 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 B8ZZF3 427 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 H0YC42 278 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 KCNK2O95069 426 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 CRYZL1O95825 349 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 KLK3P07288 261 aaPredicted RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 HEXBP07686 556 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 ATXN8OSP0DMR3 200 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 CT45A8P0DMV1 189 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 CT45A9P0DMV2 189 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 PCSK6P29122 969 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 RRM2P31350 389 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 TPD52P55327 224 aaPredicted RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 GNG2P59768 71 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms