RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 EFCAB11Q9BUY7 163 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 DLL4Q9NR61 685 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 SLC13A4Q9UKG4 626 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 A0A1B0GVI7 797 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 A0A1W2PS29 197 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 TCRBV16S1A1N1A0A5B0 115 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 IRGMA1A4Y4 181 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 PAICSP22234 425 aaKnown RBP18.38■□□□□ 0.53
TRIM58-201ENST00000366481 RNF144AP50876 292 aaPredicted RBP18.38■□□□□ 0.53
TRIM58-201ENST00000366481 PCBP3P57721 371 aaKnown RBP18.38■□□□□ 0.53
TRIM58-201ENST00000366481 ESPNLQ6ZVH7 1005 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 CAMKMTQ7Z624 323 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 UBE2Q1Q7Z7E8 422 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 RASGRP3Q8IV61 690 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 TRMT10AQ8TBZ6 339 aaKnown RBP18.38■□□□□ 0.53
TRIM58-201ENST00000366481 DOK4Q8TEW6 326 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 CXorf58Q96LI9 332 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 GPA33Q99795 319 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 BRD7Q9NPI1 651 aa18.38■□□□□ 0.53
TRIM58-201ENST00000366481 SERTM1A2A2V5 107 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 ARRDC5A6NEK1 342 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 FAM183AA6NL82 134 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 SPINT1O43278 529 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 ERAL1O75616 437 aaKnown RBP18.37■□□□□ 0.53
TRIM58-201ENST00000366481 TBX6O95947 436 aaPredicted RBP18.37■□□□□ 0.53
TRIM58-201ENST00000366481 ADH1AP07327 375 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 C4BPBP20851 252 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 ARHGDIBP52566 201 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 DEFA5Q01523 94 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 TCTE1Q5JU00 501 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 DPPA4Q7L190 304 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 C6orf120Q7Z4R8 191 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 GANCQ8TET4 914 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 ARRDC3Q96B67 414 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 NARS2Q96I59 477 aaKnown RBP18.37■□□□□ 0.53
TRIM58-201ENST00000366481 FLVCR2Q9UPI3 526 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 EFCAB14O75071 495 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 HOXB3P14651 431 aaPredicted RBP18.37■□□□□ 0.53
TRIM58-201ENST00000366481 EPCAMP16422 314 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 ST8SIA6P61647 398 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 DSG2Q14126 1118 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 FNDC3BQ53EP0 1204 aaKnown RBP18.37■□□□□ 0.53
TRIM58-201ENST00000366481 LILRA6Q6PI73 481 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 ZNF687Q8N1G0 1237 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 FBXO15Q8NCQ5 510 aaPredicted RBP18.37■□□□□ 0.53
TRIM58-201ENST00000366481 NUS1Q96E22 293 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 CHFRQ96EP1 664 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 DTD2Q96FN9 168 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 FERD3LQ96RJ6 166 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 LGR4Q9BXB1 951 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 GSDMCQ9BYG8 508 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 OR10A4Q9H209 315 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 CSNK1G3Q9Y6M4 447 aa18.37■□□□□ 0.53
TRIM58-201ENST00000366481 OTOL1A6NHN0 477 aaPredicted RBP18.36■□□□□ 0.53
TRIM58-201ENST00000366481 TFP02787 698 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 SELENOPP49908 381 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 RIN1Q13671 783 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 CDC73Q6P1J9 531 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 PRSS45Q7RTY3 260 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 C19orf43Q9BQ61 176 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 TEX12Q9BXU0 123 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 ZDHHC5Q9C0B5 715 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 KCND3Q9UK17 655 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 DOCK9Q9BZ29 2069 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 TMPRSS11DO60235 418 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 DGCR2P98153 550 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 SLC9B2Q86UD5 537 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 C12orf76Q8N812 135 aaPredicted RBP18.36■□□□□ 0.53
TRIM58-201ENST00000366481 KAT2AQ92830 837 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 CD93Q9NPY3 652 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 EQTNQ9NQ60 294 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 PCDHB16Q9NRJ7 776 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 LYARQ9NX58 379 aaKnown RBP18.36■□□□□ 0.53
TRIM58-201ENST00000366481 TNFRSF10DQ9UBN6 386 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 OR1F1O43749 312 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 FZD7O75084 574 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 PCCBP05166 539 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 PEPDP12955 493 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 UQCRC2P22695 453 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 PTBP1P26599 531 aaKnown RBP eCLIP18.36■□□□□ 0.532e-31■■■■■ 72.1
TRIM58-201ENST00000366481 ERVK-21P61565 698 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 SLC25A25Q6KCM7 469 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 MEIOBQ8N635 442 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 ACOT12Q8WYK0 555 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 TFGQ92734 400 aaPredicted RBP18.36■□□□□ 0.53
TRIM58-201ENST00000366481 ARSGQ96EG1 525 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 ZNF354BQ96LW1 612 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 ZNF436Q9C0F3 470 aaPredicted RBP18.36■□□□□ 0.53
TRIM58-201ENST00000366481 DDX31Q9H8H2 851 aaKnown RBP18.36■□□□□ 0.53
TRIM58-201ENST00000366481 MYNNQ9NPC7 610 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 CYSLTR2Q9NS75 346 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 PTTG3PQ9NZH4 202 aa18.36■□□□□ 0.53
TRIM58-201ENST00000366481 C7orf66A4D0T2 115 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 KHNYNO15037 678 aaKnown RBP18.35■□□□□ 0.53
TRIM58-201ENST00000366481 HPXP02790 462 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 TAS2R41P59536 307 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 DHCR24Q15392 516 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 HSD17B12Q53GQ0 312 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 NDUFAF5Q5TEU4 345 aa18.35■□□□□ 0.53
TRIM58-201ENST00000366481 SMARCD3Q6STE5 483 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms