RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 ELK3P41970 407 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 ARFIP1P53367 373 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 PNLIPRP2P54317 469 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 LGALS3BPQ08380 585 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 ITGADQ13349 1161 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 CUL3Q13618 768 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 EFR3AQ14156 821 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 GLYR1Q49A26 553 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF628Q5EBL2 1059 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 CDKL4Q5MAI5 379 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 STEAP4Q687X5 459 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 SLC48A1Q6P1K1 146 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 RINLQ6ZS11 566 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 PEG10Q86TG7 708 aaKnown RBP7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 NUDT13Q86X67 352 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 ANKS4BQ8N8V4 417 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 OR2V1Q8NHB1 315 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 UHMK1Q8TAS1 419 aaKnown RBP7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 WDR20Q8TBZ3 569 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 POC1BQ8TC44 478 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 RNF128Q8TEB7 428 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 FAM216AQ8WUB2 273 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 UBTD2Q8WUN7 234 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 MRPL1Q9BYD6 325 aaKnown RBP7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 BPESC1Q9GZL8 116 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 METTL17Q9H7H0 456 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 GLRX2Q9NS18 164 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 ARMCX1Q9P291 453 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 VDAC3Q9Y277 283 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 CFL2Q9Y281 166 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 MTO1Q9Y2Z2 717 aaKnown RBP7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 RNF11Q9Y3C5 154 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 SNX8Q9Y5X2 465 aa7.46□□□□□ -1.22
HMGB1P39-201ENST00000366304 IGLV3-32A0A0A0MS00 114 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 A0A1W2PR80 420 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 H0YIV9 168 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 K7EPI3 171 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 UBXN8O00124 270 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 SLU7O95391 586 aaKnown RBP7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 CSF3P09919 207 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 MTHFD2P13995 350 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 IGHV1-2P23083 117 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 CD40P25942 277 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 IL12BP29460 328 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 PDLIM4P50479 330 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF83P51522 516 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 C6orf163Q5TEZ5 329 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 HBMQ6B0K9 141 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 DEF8Q6ZN54 512 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 MYLK4Q86YV6 388 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 SLC44A2Q8IWA5 706 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 PPIL6Q8IXY8 311 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 FBXL14Q8N1E6 418 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 TXLNBQ8N3L3 684 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 RNF10Q8N5U6 811 aaKnown RBP7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 TEX9Q8N6V9 391 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 OR9A2Q8NGT5 310 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 OR2W6PQ8NHA6 318 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 OSTF1Q92882 214 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 TM4SF18Q96CE8 201 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 ANKZF1Q9H8Y5 726 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 FANCFQ9NPI8 374 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 ESM1Q9NQ30 184 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 KLHL13Q9P2N7 655 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 PRODH2Q9UF12 536 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 MCTS1Q9ULC4 181 aaKnown RBP7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 GUCA1BQ9UMX6 200 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 CHMP2BQ9UQN3 213 aa7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.45□□□□□ -1.22
HMGB1P39-201ENST00000366304 A0A0A6YYJ9 748 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 C9JVG2 144 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 SLCO1B7G3V0H7 640 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 PGM3O95394 542 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 SYNGR4O95473 234 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 IGKV1D-16P01601 117 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 CREB1P16220 341 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 CSNK2A2P19784 350 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 ARFIP2P53365 341 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 PSG6Q00889 435 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 CARTPTQ16568 116 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF239Q16600 458 aaKnown RBP7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 CPSF6Q16630 551 aaKnown RBP eCLIP7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 PRSS53Q2L4Q9 553 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 IQCCQ4KMZ1 466 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 SLC22A25Q6T423 547 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 Q6ZT83 130 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 EXOC3L1Q86VI1 746 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 TDRPQ86YL5 185 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 WDR75Q8IWA0 830 aaKnown RBP7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 GTPBP8Q8N3Z3 284 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 OR7G2Q8NG99 324 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF675Q8TD23 568 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 SLC9A6Q92581 669 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF75CPQ92670 426 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF524Q96C55 264 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 KLHL29Q96CT2 875 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 MS4A14Q96JA4 679 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 UBXN10Q96LJ8 280 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 RNF145Q96MT1 663 aa7.44□□□□□ -1.22
HMGB1P39-201ENST00000366304 ATOH8Q96SQ7 321 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms