RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 RABL3Q5HYI8 236 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 INTS11Q5TA45 600 aaKnown RBP12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 TIGD3Q6B0B8 471 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 DESI1Q6ICB0 168 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 ZAR1Q86SH2 424 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 KRT73Q86Y46 540 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 PLCZ1Q86YW0 608 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 SLC15A3Q8IY34 581 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 PEX5LQ8IYB4 626 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 PGAM4Q8N0Y7 254 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 ARHGAP24Q8N264 748 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 HIPK4Q8NE63 616 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 BHLHE22Q8NFJ8 381 aaPredicted RBP12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 OR1J4Q8NGS1 313 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 TMEM19Q96HH6 336 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 ZNF583Q96ND8 569 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 ZNF607Q96SK3 696 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 SPATA5L1Q9BVQ7 753 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 TTTY12Q9BZ98 90 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 ARMC7Q9H6L4 198 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 CACYBPQ9HB71 228 aaKnown RBP12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 ANGPT4Q9Y264 503 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 SLC35A3Q9Y2D2 325 aa12.64□□□□□ -0.39
NSMCE1-201ENST00000361439 TTLL8A6PVC2 850 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 FAM220BPB1ANY3 271 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 ATP5HO75947 161 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 PDE9AO76083 593 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 PGM3O95394 542 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 ZIC2O95409 532 aaPredicted RBP12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 DBIP07108 87 aaKnown RBP12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 THBS1P07996 1170 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 NUDT7P0C024 238 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 T-ENOLP0DO92 83 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 ZNF24P17028 368 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 RPS4Y1P22090 263 aaKnown RBP12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 PCGF2P35227 344 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 DNASE1L1P49184 302 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 EEFSECP57772 596 aaKnown RBP12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 GPR85P60893 370 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 CHRNEQ04844 493 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 SCARB2Q14108 478 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 GANABQ14697 944 aaKnown RBP12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 VMACQ2NL98 169 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 KRTCAP3Q53RY4 240 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 BICRALQ6AI39 1079 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 EIF3MQ7L2H7 374 aaKnown RBP12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 GALNT10Q86SR1 603 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 PTOV1Q86YD1 416 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 C10orf111Q8N326 155 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 TOR1AIP2Q8NFQ8 470 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 TNIP2Q8NFZ5 429 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 FAR1Q8WVX9 515 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 MAL2Q969L2 176 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 TAAR6Q96RI8 345 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 GALNT9Q9HCQ5 603 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 TUBA8Q9NY65 449 aaPredicted RBP12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 PPP4R1LQ9P1A2 415 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 TMEM181Q9P2C4 612 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 ZNF232Q9UNY5 417 aa12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 MRPS18CQ9Y3D5 142 aaKnown RBP12.63□□□□□ -0.39
NSMCE1-201ENST00000361439 SMG1Q96Q15 3661 aaKnown RBP12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 A0A0G2JMM0 328 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 A0A1W2PPB8 328 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 A0A1W2PRS3 328 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 PRORSD1PA6NEY8 169 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 SERINC4A6NH21 518 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 LRRC3CA6NJW4 275 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 KIR3DP1A8MWS1 328 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 B2RBV5 119 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 B8ZZF3 427 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 ADAM10O14672 748 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 EIF4E2O60573 245 aaKnown RBP12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 SERPINB7O75635 380 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 CPA2P48052 419 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 SLC7A2P52569 658 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 SUMO3P55854 103 aaPredicted RBP12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 PCBP3P57721 371 aaKnown RBP12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 PPIAP62937 165 aaKnown RBP12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 CBX1P83916 185 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 PLGLB1Q02325 96 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 FGFBP1Q14512 234 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 LARS2Q15031 903 aaKnown RBP12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 LIN52Q52LA3 116 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 PDZK1Q5T2W1 519 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 FNDC7Q5VTL7 733 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 ZNF324BQ6AW86 544 aaPredicted RBP12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 C6orf89Q6UWU4 347 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 APOOLQ6UXV4 268 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 PATL1Q86TB9 770 aaKnown RBP12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 MARCH3Q86UD3 253 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 ZZZ3Q8IYH5 903 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 FAM109AQ8N4B1 249 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 FADS6Q8N9I5 356 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 WDSUB1Q8N9V3 476 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 OR2T12Q8NG77 320 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 NFKBIDQ8NI38 313 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 RASSF5Q8WWW0 418 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 SLC35B4Q969S0 331 aa12.62□□□□□ -0.39
NSMCE1-201ENST00000361439 SNRNP40Q96DI7 357 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms