RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 TRBV11-1A0A0K0K1C0 115 aa12.66□□□□□ -0.38
LDB3-202ENST00000361373 DNAJB6O75190 326 aa12.66□□□□□ -0.38
LDB3-202ENST00000361373 PPP1R3DO95685 299 aa12.66□□□□□ -0.38
LDB3-202ENST00000361373 SRFP11831 508 aa12.66□□□□□ -0.38
LDB3-202ENST00000361373 KCNJ10P78508 379 aa12.66□□□□□ -0.38
LDB3-202ENST00000361373 MS4A2Q01362 244 aa12.66□□□□□ -0.38
LDB3-202ENST00000361373 MBTPS1Q14703 1052 aa12.66□□□□□ -0.38
LDB3-202ENST00000361373 SOX17Q9H6I2 414 aaPredicted RBP12.66□□□□□ -0.38
LDB3-202ENST00000361373 NUDT15Q9NV35 164 aa12.66□□□□□ -0.38
LDB3-202ENST00000361373 PPP6CO00743 305 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 PET100P0DJ07 73 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 IDUAP35475 653 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 MAZP56270 477 aaKnown RBP12.65□□□□□ -0.38
LDB3-202ENST00000361373 PUDPQ08623 228 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 CARTPTQ16568 116 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 TRIM61Q5EBN2 209 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 ZNF613Q6PF04 617 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 RSPO2Q6UXX9 243 aaPredicted RBP12.65□□□□□ -0.38
LDB3-202ENST00000361373 TMED4Q7Z7H5 227 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 RNF113BQ8IZP6 322 aaKnown RBP12.65□□□□□ -0.38
LDB3-202ENST00000361373 ZNF615Q8N8J6 731 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 GATAD2BQ8WXI9 593 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 BPIFA2Q96DR5 249 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 ATG5Q9H1Y0 275 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 ZNF337Q9Y3M9 751 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 GNAO1P09471 354 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 MAP2K4P45985 399 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 ACVR1Q04771 509 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 RBPJQ06330 500 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 METRNLQ641Q3 311 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 DCDC5Q6ZRR9 648 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 OR5D16Q8NGK9 328 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 RBM24Q9BX46 236 aaKnown RBP12.65□□□□□ -0.38
LDB3-202ENST00000361373 IRF2BPLQ9H1B7 796 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 FN3KQ9H479 309 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 FGF21Q9NSA1 209 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 APOL3O95236 402 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 C3orf33Q6P1S2 294 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 ARL5BQ96KC2 179 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 SLC5A7Q9GZV3 580 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 RAB9BQ9NP90 201 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 INPP5EQ9NRR6 644 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 KCND3Q9UK17 655 aa12.65□□□□□ -0.38
LDB3-202ENST00000361373 YES1P07947 543 aa12.65□□□□□ -0.39
LDB3-202ENST00000361373 SFTPDP35247 375 aa12.65□□□□□ -0.39
LDB3-202ENST00000361373 GPR18Q14330 331 aa12.65□□□□□ -0.39
LDB3-202ENST00000361373 RAB11BQ15907 218 aa12.65□□□□□ -0.39
LDB3-202ENST00000361373 STX12Q86Y82 276 aa12.65□□□□□ -0.39
LDB3-202ENST00000361373 CPOQ8IVL8 374 aa12.65□□□□□ -0.39
LDB3-202ENST00000361373 OR5AK2Q8NH90 309 aa12.65□□□□□ -0.39
LDB3-202ENST00000361373 BIRC8Q96P09 236 aa12.65□□□□□ -0.39
LDB3-202ENST00000361373 ULBP3Q9BZM4 244 aa12.65□□□□□ -0.39
LDB3-202ENST00000361373 NUFIP1Q9UHK0 495 aaKnown RBP12.65□□□□□ -0.39
LDB3-202ENST00000361373 ZNF443Q9Y2A4 671 aaPredicted RBP12.65□□□□□ -0.39
LDB3-202ENST00000361373 DIRAS3O95661 229 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 IFNA7P01567 189 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 PKLRP30613 574 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 SLC5A12Q1EHB4 618 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 NKAPLQ5M9Q1 402 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 FAM180BQ6P0A1 224 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 WFDC5Q8TCV5 224 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 OR10A4Q9H209 315 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 TCRBV3S1A0A5B6 114 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 TARM1B6A8C7 271 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 KIAA0513O60268 411 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 ADPRHP54922 357 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 WNT4P56705 351 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 HBA1P69905 142 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 C14orf28Q4W4Y0 310 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 DPY19L2P1Q6NXN4 242 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 TMEM53Q6P2H8 277 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 LKAAEAR1Q8TD35 194 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 EGLN2Q96KS0 407 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 FER1L6-AS2Q96M78 137 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 SLC30A3Q99726 388 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 MACROD1Q9BQ69 325 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 GAREM1Q9H706 876 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 FARSAQ9Y285 508 aaKnown RBP12.64□□□□□ -0.39
LDB3-202ENST00000361373 OR7A17O14581 309 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 POU3F2P20265 443 aaPredicted RBP12.64□□□□□ -0.39
LDB3-202ENST00000361373 RAB3BP20337 219 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 ART1P52961 327 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 SRYQ05066 204 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 RAB40BQ12829 278 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 CDK10Q15131 360 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 C22orf42Q6IC83 251 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 UGT2A3Q6UWM9 527 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 PRR22Q8IZ63 422 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 LINC01599Q8WXQ3 324 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 MSLNLQ96KJ4 702 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 LOC102725191A0A1B0GVB3 256 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 H3BML4 177 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 CSNK1A1P48729 337 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 MZT1Q08AG7 82 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 EXOSC7Q15024 291 aaKnown RBP12.64□□□□□ -0.39
LDB3-202ENST00000361373 SLC37A3Q8NCC5 494 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 OR13H1Q8NG92 308 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 OR8S1Q8NH09 359 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 PPP1R35Q8TAP8 253 aa12.64□□□□□ -0.39
LDB3-202ENST00000361373 FNDC8Q8TC99 324 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms